Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa4Q8CA71 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa4Q8CA71 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa4Q8CA71 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa4Q8CA71 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Shisa4Q8CA71 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa4Q8CA71 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.38■□□□□ 0.21
Shisa4Q8CA71 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa4Q8CA71 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.37■□□□□ 0.21
Shisa4Q8CA71 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Gm6912-201ENSMUST00000117218 544 ntBASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Gm15163-201ENSMUST00000120749 1302 ntBASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Shisa4Q8CA71 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Gm8927-201ENSMUST00000181978 981 ntBASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Gm28631-201ENSMUST00000190740 334 ntBASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Gm3222-201ENSMUST00000071282 990 ntBASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shisa4Q8CA71 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa4Q8CA71 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa4Q8CA71 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa4Q8CA71 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa4Q8CA71 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa4Q8CA71 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa4Q8CA71 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.35■□□□□ 0.21
Shisa4Q8CA71 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa4Q8CA71 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa4Q8CA71 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Shisa4Q8CA71 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.35■□□□□ 0.21
Shisa4Q8CA71 Gm13385-201ENSMUST00000121089 220 ntBASIC16.35■□□□□ 0.21
Shisa4Q8CA71 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa4Q8CA71 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.35■□□□□ 0.21
Shisa4Q8CA71 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.35■□□□□ 0.21
Shisa4Q8CA71 Gm9797-201ENSMUST00000052902 613 ntBASIC16.35■□□□□ 0.21
Shisa4Q8CA71 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa4Q8CA71 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Shisa4Q8CA71 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa4Q8CA71 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Shisa4Q8CA71 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa4Q8CA71 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Shisa4Q8CA71 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms