Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Gm9823-201ENSMUST00000051212 327 ntBASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Gm8652-201ENSMUST00000181363 964 ntBASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Gm8598-201ENSMUST00000221184 836 ntBASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Gm7399-201ENSMUST00000032395 858 ntBASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Col6a6Q8C6K9 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Gm11814-201ENSMUST00000119515 929 ntBASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms