Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp44Q8C2S0 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp44Q8C2S0 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
Usp44Q8C2S0 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp44Q8C2S0 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Usp44Q8C2S0 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp44Q8C2S0 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Usp44Q8C2S0 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp44Q8C2S0 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Usp44Q8C2S0 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Usp44Q8C2S0 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.55■□□□□ 0.24
Usp44Q8C2S0 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Usp44Q8C2S0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Usp44Q8C2S0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
Usp44Q8C2S0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.55■□□□□ 0.24
Usp44Q8C2S0 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp44Q8C2S0 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp44Q8C2S0 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.55■□□□□ 0.24
Usp44Q8C2S0 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp44Q8C2S0 Gm21470-201ENSMUST00000187680 696 ntBASIC16.55■□□□□ 0.24
Usp44Q8C2S0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp44Q8C2S0 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp44Q8C2S0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp44Q8C2S0 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Usp44Q8C2S0 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp44Q8C2S0 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.55■□□□□ 0.24
Usp44Q8C2S0 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Usp44Q8C2S0 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp44Q8C2S0 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Usp44Q8C2S0 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Usp44Q8C2S0 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Usp44Q8C2S0 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp44Q8C2S0 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp44Q8C2S0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp44Q8C2S0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp44Q8C2S0 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Usp44Q8C2S0 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Usp44Q8C2S0 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp44Q8C2S0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.54■□□□□ 0.24
Usp44Q8C2S0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Usp44Q8C2S0 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Usp44Q8C2S0 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp44Q8C2S0 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Usp44Q8C2S0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.54■□□□□ 0.24
Usp44Q8C2S0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Usp44Q8C2S0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp44Q8C2S0 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp44Q8C2S0 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp44Q8C2S0 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp44Q8C2S0 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp44Q8C2S0 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp44Q8C2S0 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp44Q8C2S0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp44Q8C2S0 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp44Q8C2S0 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Usp44Q8C2S0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp44Q8C2S0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Usp44Q8C2S0 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp44Q8C2S0 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp44Q8C2S0 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp44Q8C2S0 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Usp44Q8C2S0 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp44Q8C2S0 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Usp44Q8C2S0 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Usp44Q8C2S0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp44Q8C2S0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.53■□□□□ 0.24
Usp44Q8C2S0 Mir497b-201ENSMUST00000093601 125 ntBASIC16.53■□□□□ 0.24
Usp44Q8C2S0 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp44Q8C2S0 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Usp44Q8C2S0 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp44Q8C2S0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Usp44Q8C2S0 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp44Q8C2S0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp44Q8C2S0 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp44Q8C2S0 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp44Q8C2S0 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Usp44Q8C2S0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp44Q8C2S0 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp44Q8C2S0 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp44Q8C2S0 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp44Q8C2S0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp44Q8C2S0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp44Q8C2S0 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp44Q8C2S0 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp44Q8C2S0 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp44Q8C2S0 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Usp44Q8C2S0 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Usp44Q8C2S0 Gm12585-201ENSMUST00000117307 290 ntBASIC16.52■□□□□ 0.24
Usp44Q8C2S0 Gm4875-201ENSMUST00000118257 786 ntBASIC16.52■□□□□ 0.24
Usp44Q8C2S0 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Usp44Q8C2S0 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Usp44Q8C2S0 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Usp44Q8C2S0 Gm27989-201ENSMUST00000184721 107 ntBASIC16.52■□□□□ 0.24
Usp44Q8C2S0 Gm10766-202ENSMUST00000194123 606 ntBASIC16.52■□□□□ 0.24
Usp44Q8C2S0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Usp44Q8C2S0 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp44Q8C2S0 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp44Q8C2S0 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Usp44Q8C2S0 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Usp44Q8C2S0 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms