Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.61□□□□□ -0.39
Ube3dQ8BX13 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Gm9824-201ENSMUST00000178707 561 ntBASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ube3dQ8BX13 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.59□□□□□ -0.39
Ube3dQ8BX13 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ube3dQ8BX13 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms