Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Gm27622-201ENSMUST00000183779 60 ntBASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Gm28630-201ENSMUST00000187806 498 ntBASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sfr1Q8BP27 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Gm23547-201ENSMUST00000158210 271 ntBASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sfr1Q8BP27 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Gm27631-201ENSMUST00000184163 466 ntBASIC14.43□□□□□ -0.1
Sfr1Q8BP27 AA619741-201ENSMUST00000195095 646 ntBASIC14.43□□□□□ -0.1
Sfr1Q8BP27 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sfr1Q8BP27 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms