Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.28■□□□□ 0.2
VmacQ8BP01 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VmacQ8BP01 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VmacQ8BP01 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VmacQ8BP01 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VmacQ8BP01 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
VmacQ8BP01 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VmacQ8BP01 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VmacQ8BP01 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.28■□□□□ 0.2
VmacQ8BP01 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VmacQ8BP01 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.27■□□□□ 0.2
VmacQ8BP01 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VmacQ8BP01 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VmacQ8BP01 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
VmacQ8BP01 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VmacQ8BP01 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VmacQ8BP01 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VmacQ8BP01 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VmacQ8BP01 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VmacQ8BP01 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VmacQ8BP01 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VmacQ8BP01 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VmacQ8BP01 Gm12585-201ENSMUST00000117307 290 ntBASIC16.27■□□□□ 0.2
VmacQ8BP01 Gm15393-201ENSMUST00000120499 219 ntBASIC16.27■□□□□ 0.2
VmacQ8BP01 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VmacQ8BP01 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VmacQ8BP01 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VmacQ8BP01 Gm29741-201ENSMUST00000192667 421 ntBASIC16.27■□□□□ 0.2
VmacQ8BP01 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.27■□□□□ 0.2
VmacQ8BP01 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
VmacQ8BP01 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VmacQ8BP01 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VmacQ8BP01 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VmacQ8BP01 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VmacQ8BP01 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VmacQ8BP01 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
VmacQ8BP01 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VmacQ8BP01 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VmacQ8BP01 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
VmacQ8BP01 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VmacQ8BP01 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VmacQ8BP01 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VmacQ8BP01 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
VmacQ8BP01 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
VmacQ8BP01 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VmacQ8BP01 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VmacQ8BP01 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VmacQ8BP01 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VmacQ8BP01 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VmacQ8BP01 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.26■□□□□ 0.19
VmacQ8BP01 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VmacQ8BP01 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
VmacQ8BP01 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VmacQ8BP01 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
VmacQ8BP01 Gm4804-201ENSMUST00000182234 999 ntBASIC16.26■□□□□ 0.19
VmacQ8BP01 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.26■□□□□ 0.19
VmacQ8BP01 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
VmacQ8BP01 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
VmacQ8BP01 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
VmacQ8BP01 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VmacQ8BP01 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
VmacQ8BP01 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VmacQ8BP01 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
VmacQ8BP01 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VmacQ8BP01 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VmacQ8BP01 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.26■□□□□ 0.19
VmacQ8BP01 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
VmacQ8BP01 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VmacQ8BP01 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VmacQ8BP01 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VmacQ8BP01 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VmacQ8BP01 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VmacQ8BP01 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VmacQ8BP01 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VmacQ8BP01 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VmacQ8BP01 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
VmacQ8BP01 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VmacQ8BP01 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VmacQ8BP01 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
VmacQ8BP01 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VmacQ8BP01 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VmacQ8BP01 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VmacQ8BP01 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
VmacQ8BP01 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VmacQ8BP01 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
VmacQ8BP01 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VmacQ8BP01 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VmacQ8BP01 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VmacQ8BP01 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VmacQ8BP01 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
VmacQ8BP01 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VmacQ8BP01 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
VmacQ8BP01 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VmacQ8BP01 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VmacQ8BP01 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
VmacQ8BP01 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
VmacQ8BP01 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
VmacQ8BP01 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VmacQ8BP01 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VmacQ8BP01 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms