Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col16a1Q8BLX7 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col16a1Q8BLX7 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Col16a1Q8BLX7 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Col16a1Q8BLX7 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Col16a1Q8BLX7 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Col16a1Q8BLX7 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC18.25■□□□□ 0.51
Col16a1Q8BLX7 Gm9755-201ENSMUST00000032981 1356 ntBASIC18.25■□□□□ 0.51
Col16a1Q8BLX7 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col16a1Q8BLX7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col16a1Q8BLX7 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col16a1Q8BLX7 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col16a1Q8BLX7 Gm37497-201ENSMUST00000195830 798 ntBASIC18.25■□□□□ 0.51
Col16a1Q8BLX7 Gm45865-201ENSMUST00000211815 945 ntBASIC18.25■□□□□ 0.51
Col16a1Q8BLX7 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col16a1Q8BLX7 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC18.25■□□□□ 0.51
Col16a1Q8BLX7 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Col16a1Q8BLX7 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col16a1Q8BLX7 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col16a1Q8BLX7 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 Gm13786-201ENSMUST00000122371 333 ntBASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 Gm6334-201ENSMUST00000207083 228 ntBASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col16a1Q8BLX7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col16a1Q8BLX7 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col16a1Q8BLX7 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC18.23■□□□□ 0.51
Col16a1Q8BLX7 Gm12020-201ENSMUST00000119030 2042 ntBASIC18.23■□□□□ 0.51
Col16a1Q8BLX7 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col16a1Q8BLX7 Gm11400-201ENSMUST00000120853 1214 ntBASIC18.23■□□□□ 0.51
Col16a1Q8BLX7 Gm25927-201ENSMUST00000175058 117 ntBASIC18.23■□□□□ 0.51
Col16a1Q8BLX7 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col16a1Q8BLX7 Gm29396-201ENSMUST00000185659 716 ntBASIC18.23■□□□□ 0.51
Col16a1Q8BLX7 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col16a1Q8BLX7 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Col16a1Q8BLX7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col16a1Q8BLX7 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col16a1Q8BLX7 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col16a1Q8BLX7 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col16a1Q8BLX7 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col16a1Q8BLX7 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Col16a1Q8BLX7 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col16a1Q8BLX7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Col16a1Q8BLX7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Mir7070-201ENSMUST00000183657 86 ntBASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Gm42627-201ENSMUST00000197347 224 ntBASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Gm18935-201ENSMUST00000212692 664 ntBASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 AC154462.2-201ENSMUST00000227519 370 ntBASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Gm20632-201ENSMUST00000176760 2427 ntBASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col16a1Q8BLX7 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Gm25261-201ENSMUST00000157416 134 ntBASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms