Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SynbQ8BI41 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SynbQ8BI41 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SynbQ8BI41 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SynbQ8BI41 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SynbQ8BI41 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SynbQ8BI41 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SynbQ8BI41 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SynbQ8BI41 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SynbQ8BI41 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SynbQ8BI41 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
SynbQ8BI41 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
SynbQ8BI41 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SynbQ8BI41 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SynbQ8BI41 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SynbQ8BI41 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.55□□□□□ -0.24
SynbQ8BI41 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SynbQ8BI41 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SynbQ8BI41 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SynbQ8BI41 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SynbQ8BI41 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SynbQ8BI41 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SynbQ8BI41 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SynbQ8BI41 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SynbQ8BI41 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SynbQ8BI41 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.54□□□□□ -0.24
SynbQ8BI41 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SynbQ8BI41 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SynbQ8BI41 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SynbQ8BI41 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SynbQ8BI41 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SynbQ8BI41 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SynbQ8BI41 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SynbQ8BI41 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SynbQ8BI41 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SynbQ8BI41 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SynbQ8BI41 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.54□□□□□ -0.24
SynbQ8BI41 Gm12490-201ENSMUST00000120255 560 ntBASIC13.54□□□□□ -0.24
SynbQ8BI41 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.54□□□□□ -0.24
SynbQ8BI41 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SynbQ8BI41 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.54□□□□□ -0.24
SynbQ8BI41 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SynbQ8BI41 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SynbQ8BI41 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SynbQ8BI41 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SynbQ8BI41 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SynbQ8BI41 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SynbQ8BI41 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SynbQ8BI41 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SynbQ8BI41 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SynbQ8BI41 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SynbQ8BI41 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SynbQ8BI41 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SynbQ8BI41 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
SynbQ8BI41 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.54□□□□□ -0.24
SynbQ8BI41 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SynbQ8BI41 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SynbQ8BI41 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SynbQ8BI41 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SynbQ8BI41 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SynbQ8BI41 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SynbQ8BI41 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SynbQ8BI41 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
SynbQ8BI41 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SynbQ8BI41 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SynbQ8BI41 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SynbQ8BI41 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SynbQ8BI41 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.53□□□□□ -0.24
SynbQ8BI41 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SynbQ8BI41 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SynbQ8BI41 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SynbQ8BI41 Gm14127-201ENSMUST00000117906 678 ntBASIC13.53□□□□□ -0.24
SynbQ8BI41 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SynbQ8BI41 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SynbQ8BI41 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.53□□□□□ -0.24
SynbQ8BI41 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
SynbQ8BI41 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SynbQ8BI41 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SynbQ8BI41 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SynbQ8BI41 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SynbQ8BI41 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
SynbQ8BI41 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SynbQ8BI41 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
SynbQ8BI41 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.53□□□□□ -0.24
SynbQ8BI41 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.53□□□□□ -0.24
SynbQ8BI41 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SynbQ8BI41 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SynbQ8BI41 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
SynbQ8BI41 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SynbQ8BI41 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
SynbQ8BI41 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.53□□□□□ -0.24
SynbQ8BI41 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SynbQ8BI41 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SynbQ8BI41 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SynbQ8BI41 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
SynbQ8BI41 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SynbQ8BI41 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SynbQ8BI41 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SynbQ8BI41 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SynbQ8BI41 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms