Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gm5682-201ENSMUST00000173402 505 ntBASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Gm12644-201ENSMUST00000119935 606 ntBASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Gm23634-201ENSMUST00000175071 91 ntBASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Slc5a7Q8BGY9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Slc5a7Q8BGY9 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.43
Slc5a7Q8BGY9 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Slc5a7Q8BGY9 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Slc5a7Q8BGY9 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Gm4535-201ENSMUST00000182274 558 ntBASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Gm10355-201ENSMUST00000097146 517 ntBASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc5a7Q8BGY9 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms