Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Gm27618-201ENSMUST00000183671 60 ntBASIC13.99□□□□□ -0.17
Ubp1Q811S7 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.99□□□□□ -0.17
Ubp1Q811S7 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.99□□□□□ -0.17
Ubp1Q811S7 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.98□□□□□ -0.17
Ubp1Q811S7 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.98□□□□□ -0.17
Ubp1Q811S7 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.98□□□□□ -0.17
Ubp1Q811S7 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ubp1Q811S7 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubp1Q811S7 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubp1Q811S7 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubp1Q811S7 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubp1Q811S7 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubp1Q811S7 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubp1Q811S7 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubp1Q811S7 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubp1Q811S7 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubp1Q811S7 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubp1Q811S7 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubp1Q811S7 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubp1Q811S7 Gm24543-201ENSMUST00000103867 82 ntBASIC13.97□□□□□ -0.17
Ubp1Q811S7 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.97□□□□□ -0.17
Ubp1Q811S7 Gm17837-201ENSMUST00000186435 985 ntBASIC13.97□□□□□ -0.17
Ubp1Q811S7 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ubp1Q811S7 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.97□□□□□ -0.17
Ubp1Q811S7 Gm45453-201ENSMUST00000211758 853 ntBASIC13.97□□□□□ -0.17
Ubp1Q811S7 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.97□□□□□ -0.17
Ubp1Q811S7 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubp1Q811S7 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubp1Q811S7 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubp1Q811S7 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubp1Q811S7 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Ubp1Q811S7 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ubp1Q811S7 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubp1Q811S7 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubp1Q811S7 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ubp1Q811S7 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ubp1Q811S7 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ubp1Q811S7 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ubp1Q811S7 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ubp1Q811S7 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ubp1Q811S7 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ubp1Q811S7 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms