Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf40bQ80W14 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf40bQ80W14 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Prpf40bQ80W14 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Prpf40bQ80W14 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Prpf40bQ80W14 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Prpf40bQ80W14 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.33■□□□□ 0.2
Prpf40bQ80W14 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.32■□□□□ 0.2
Prpf40bQ80W14 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.32■□□□□ 0.2
Prpf40bQ80W14 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf40bQ80W14 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 AC114008.2-201ENSMUST00000227699 1347 ntBASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Gm5479-201ENSMUST00000160578 435 ntBASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms