Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Pcdh19Q80TF3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Pcdh19Q80TF3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.9□□□□□ -0.19
Pcdh19Q80TF3 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Pcdh19Q80TF3 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Pcdh19Q80TF3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.9□□□□□ -0.19
Pcdh19Q80TF3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Gm44608-201ENSMUST00000206827 855 ntBASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Gm5425-201ENSMUST00000214125 459 ntBASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Gm6218-201ENSMUST00000219812 628 ntBASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh19Q80TF3 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 Gm12859-201ENSMUST00000117834 427 ntBASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 Gm13323-201ENSMUST00000120245 1151 ntBASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdh19Q80TF3 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 Gm4804-201ENSMUST00000182234 999 ntBASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms