Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.5■□□□□ 0.07
Ush1gQ80T11 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.5■□□□□ 0.07
Ush1gQ80T11 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ush1gQ80T11 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ush1gQ80T11 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Ush1gQ80T11 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ush1gQ80T11 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.5■□□□□ 0.07
Ush1gQ80T11 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Ush1gQ80T11 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ush1gQ80T11 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ush1gQ80T11 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ush1gQ80T11 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ush1gQ80T11 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Ush1gQ80T11 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ush1gQ80T11 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.49■□□□□ 0.07
Ush1gQ80T11 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ush1gQ80T11 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.49■□□□□ 0.07
Ush1gQ80T11 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ush1gQ80T11 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ush1gQ80T11 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.49■□□□□ 0.07
Ush1gQ80T11 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ush1gQ80T11 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ush1gQ80T11 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ush1gQ80T11 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ush1gQ80T11 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.49■□□□□ 0.07
Ush1gQ80T11 Gm12585-201ENSMUST00000117307 290 ntBASIC15.49■□□□□ 0.07
Ush1gQ80T11 Gm10275-202ENSMUST00000168697 495 ntBASIC15.49■□□□□ 0.07
Ush1gQ80T11 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.49■□□□□ 0.07
Ush1gQ80T11 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ush1gQ80T11 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ush1gQ80T11 Gm10275-201ENSMUST00000092620 635 ntBASIC15.49■□□□□ 0.07
Ush1gQ80T11 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ush1gQ80T11 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.49■□□□□ 0.07
Ush1gQ80T11 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ush1gQ80T11 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ush1gQ80T11 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ush1gQ80T11 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ush1gQ80T11 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ush1gQ80T11 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ush1gQ80T11 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
Ush1gQ80T11 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ush1gQ80T11 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.48■□□□□ 0.07
Ush1gQ80T11 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ush1gQ80T11 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Ush1gQ80T11 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Ush1gQ80T11 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ush1gQ80T11 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ush1gQ80T11 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Ush1gQ80T11 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.48■□□□□ 0.07
Ush1gQ80T11 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ush1gQ80T11 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ush1gQ80T11 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.48■□□□□ 0.07
Ush1gQ80T11 Gm9002-201ENSMUST00000178437 499 ntBASIC15.48■□□□□ 0.07
Ush1gQ80T11 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ush1gQ80T11 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.48■□□□□ 0.07
Ush1gQ80T11 Gm6266-201ENSMUST00000203844 806 ntBASIC15.48■□□□□ 0.07
Ush1gQ80T11 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ush1gQ80T11 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ush1gQ80T11 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ush1gQ80T11 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Ush1gQ80T11 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Ush1gQ80T11 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ush1gQ80T11 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ush1gQ80T11 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ush1gQ80T11 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ush1gQ80T11 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ush1gQ80T11 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ush1gQ80T11 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ush1gQ80T11 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ush1gQ80T11 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ush1gQ80T11 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ush1gQ80T11 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ush1gQ80T11 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ush1gQ80T11 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ush1gQ80T11 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ush1gQ80T11 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ush1gQ80T11 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ush1gQ80T11 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Ush1gQ80T11 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ush1gQ80T11 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ush1gQ80T11 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Ush1gQ80T11 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Ush1gQ80T11 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ush1gQ80T11 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Ush1gQ80T11 Gm15393-201ENSMUST00000120499 219 ntBASIC15.47■□□□□ 0.07
Ush1gQ80T11 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.47■□□□□ 0.07
Ush1gQ80T11 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ush1gQ80T11 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Ush1gQ80T11 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Ush1gQ80T11 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Ush1gQ80T11 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ush1gQ80T11 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Ush1gQ80T11 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ush1gQ80T11 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ush1gQ80T11 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.47■□□□□ 0.07
Ush1gQ80T11 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ush1gQ80T11 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Ush1gQ80T11 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Ush1gQ80T11 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ush1gQ80T11 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms