Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Prpf38bQ80SY5 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf38bQ80SY5 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf38bQ80SY5 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf38bQ80SY5 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Prpf38bQ80SY5 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf38bQ80SY5 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf38bQ80SY5 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.83□□□□□ -0.04
Prpf38bQ80SY5 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.83□□□□□ -0.04
Prpf38bQ80SY5 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.83□□□□□ -0.04
Prpf38bQ80SY5 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf38bQ80SY5 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.83□□□□□ -0.04
Prpf38bQ80SY5 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.83□□□□□ -0.04
Prpf38bQ80SY5 Gm5035-201ENSMUST00000215581 927 ntBASIC14.83□□□□□ -0.04
Prpf38bQ80SY5 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf38bQ80SY5 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.83□□□□□ -0.04
Prpf38bQ80SY5 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf38bQ80SY5 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf38bQ80SY5 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Prpf38bQ80SY5 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf38bQ80SY5 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Prpf38bQ80SY5 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.83□□□□□ -0.04
Prpf38bQ80SY5 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf38bQ80SY5 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.83□□□□□ -0.04
Prpf38bQ80SY5 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Gm5566-201ENSMUST00000116118 459 ntBASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Gm12957-201ENSMUST00000117835 377 ntBASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Gm4875-201ENSMUST00000118257 786 ntBASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Gm9719-201ENSMUST00000162765 543 ntBASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Gm3436-201ENSMUST00000179930 840 ntBASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Celf4-206ENSMUST00000224553 1729 ntBASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf38bQ80SY5 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 Mir3547-201ENSMUST00000175461 88 ntBASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf38bQ80SY5 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms