Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vma21Q78T54 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.55□□□□□ -0.56
Vma21Q78T54 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vma21Q78T54 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.55□□□□□ -0.56
Vma21Q78T54 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Vma21Q78T54 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.54□□□□□ -0.56
Vma21Q78T54 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vma21Q78T54 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Vma21Q78T54 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vma21Q78T54 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Vma21Q78T54 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Vma21Q78T54 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Vma21Q78T54 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vma21Q78T54 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vma21Q78T54 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.54□□□□□ -0.56
Vma21Q78T54 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Vma21Q78T54 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vma21Q78T54 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Vma21Q78T54 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Vma21Q78T54 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vma21Q78T54 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vma21Q78T54 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vma21Q78T54 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vma21Q78T54 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Vma21Q78T54 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vma21Q78T54 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vma21Q78T54 Acot6-202ENSMUST00000222921 3622 ntBASIC11.54□□□□□ -0.56
Vma21Q78T54 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Vma21Q78T54 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Vma21Q78T54 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vma21Q78T54 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vma21Q78T54 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vma21Q78T54 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vma21Q78T54 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vma21Q78T54 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vma21Q78T54 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vma21Q78T54 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.53□□□□□ -0.56
Vma21Q78T54 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vma21Q78T54 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vma21Q78T54 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.53□□□□□ -0.56
Vma21Q78T54 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vma21Q78T54 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vma21Q78T54 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vma21Q78T54 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vma21Q78T54 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vma21Q78T54 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.53□□□□□ -0.56
Vma21Q78T54 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Vma21Q78T54 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vma21Q78T54 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vma21Q78T54 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.53□□□□□ -0.56
Vma21Q78T54 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vma21Q78T54 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Vma21Q78T54 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vma21Q78T54 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vma21Q78T54 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vma21Q78T54 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vma21Q78T54 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vma21Q78T54 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vma21Q78T54 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Vma21Q78T54 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Vma21Q78T54 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Vma21Q78T54 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
Vma21Q78T54 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Vma21Q78T54 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Vma21Q78T54 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.52□□□□□ -0.56
Vma21Q78T54 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Vma21Q78T54 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Vma21Q78T54 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.52□□□□□ -0.57
Vma21Q78T54 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vma21Q78T54 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.52□□□□□ -0.57
Vma21Q78T54 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.52□□□□□ -0.57
Vma21Q78T54 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Vma21Q78T54 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Vma21Q78T54 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Vma21Q78T54 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Vma21Q78T54 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Vma21Q78T54 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vma21Q78T54 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vma21Q78T54 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Vma21Q78T54 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Vma21Q78T54 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Vma21Q78T54 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vma21Q78T54 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Vma21Q78T54 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Vma21Q78T54 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Vma21Q78T54 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vma21Q78T54 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Vma21Q78T54 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vma21Q78T54 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vma21Q78T54 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vma21Q78T54 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vma21Q78T54 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vma21Q78T54 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Vma21Q78T54 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vma21Q78T54 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vma21Q78T54 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Vma21Q78T54 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Vma21Q78T54 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Vma21Q78T54 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vma21Q78T54 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms