Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.17□□□□□ -0.3
Timd4Q6U7R4 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Mir125a-201ENSMUST00000083545 68 ntBASIC13.17□□□□□ -0.3
Timd4Q6U7R4 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timd4Q6U7R4 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timd4Q6U7R4 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timd4Q6U7R4 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timd4Q6U7R4 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.15□□□□□ -0.3
Timd4Q6U7R4 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timd4Q6U7R4 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Timd4Q6U7R4 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timd4Q6U7R4 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Timd4Q6U7R4 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timd4Q6U7R4 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Timd4Q6U7R4 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timd4Q6U7R4 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Timd4Q6U7R4 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timd4Q6U7R4 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timd4Q6U7R4 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timd4Q6U7R4 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Timd4Q6U7R4 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timd4Q6U7R4 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Timd4Q6U7R4 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Timd4Q6U7R4 Gm13453-201ENSMUST00000118708 357 ntBASIC13.15□□□□□ -0.3
Timd4Q6U7R4 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Timd4Q6U7R4 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Timd4Q6U7R4 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Timd4Q6U7R4 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.15□□□□□ -0.3
Timd4Q6U7R4 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.15□□□□□ -0.3
Timd4Q6U7R4 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Timd4Q6U7R4 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.15□□□□□ -0.3
Timd4Q6U7R4 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.15□□□□□ -0.3
Timd4Q6U7R4 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timd4Q6U7R4 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms