Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Matn2-206ENSMUST00000228570 2798 ntBASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Gm45747-201ENSMUST00000212203 999 ntBASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 Gm5479-201ENSMUST00000160578 435 ntBASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Smarcd3Q6P9Z1 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcd3Q6P9Z1 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms