Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 Gm13829-201ENSMUST00000119600 138 ntBASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 Mir6392-201ENSMUST00000184924 108 ntBASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdzrn3Q69ZS0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pdzrn3Q69ZS0 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdzrn3Q69ZS0 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.34■□□□□ 0.37
Pdzrn3Q69ZS0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pdzrn3Q69ZS0 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Pdzrn3Q69ZS0 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.34■□□□□ 0.37
Pdzrn3Q69ZS0 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
Pdzrn3Q69ZS0 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pdzrn3Q69ZS0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdzrn3Q69ZS0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pdzrn3Q69ZS0 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pdzrn3Q69ZS0 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC17.34■□□□□ 0.37
Pdzrn3Q69ZS0 Gm44719-201ENSMUST00000206404 149 ntBASIC17.34■□□□□ 0.37
Pdzrn3Q69ZS0 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdzrn3Q69ZS0 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC17.34■□□□□ 0.37
Pdzrn3Q69ZS0 AC155286.1-201ENSMUST00000218632 448 ntBASIC17.34■□□□□ 0.37
Pdzrn3Q69ZS0 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdzrn3Q69ZS0 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pdzrn3Q69ZS0 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdzrn3Q69ZS0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdzrn3Q69ZS0 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdzrn3Q69ZS0 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdzrn3Q69ZS0 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdzrn3Q69ZS0 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pdzrn3Q69ZS0 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdzrn3Q69ZS0 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdzrn3Q69ZS0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdzrn3Q69ZS0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdzrn3Q69ZS0 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdzrn3Q69ZS0 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdzrn3Q69ZS0 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Pdzrn3Q69ZS0 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdzrn3Q69ZS0 BC001981-202ENSMUST00000191393 1545 ntBASIC17.33■□□□□ 0.37
Pdzrn3Q69ZS0 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdzrn3Q69ZS0 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdzrn3Q69ZS0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pdzrn3Q69ZS0 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pdzrn3Q69ZS0 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Pdzrn3Q69ZS0 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdzrn3Q69ZS0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdzrn3Q69ZS0 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdzrn3Q69ZS0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdzrn3Q69ZS0 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdzrn3Q69ZS0 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC17.33■□□□□ 0.36
Pdzrn3Q69ZS0 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Pdzrn3Q69ZS0 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdzrn3Q69ZS0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdzrn3Q69ZS0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdzrn3Q69ZS0 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Pdzrn3Q69ZS0 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Pdzrn3Q69ZS0 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Pdzrn3Q69ZS0 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdzrn3Q69ZS0 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdzrn3Q69ZS0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 Mir7085-201ENSMUST00000184353 66 ntBASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 Gm6916-202ENSMUST00000205523 195 ntBASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms