Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col11a2Q64739 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col11a2Q64739 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.77■□□□□ 0.28
Col11a2Q64739 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col11a2Q64739 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Col11a2Q64739 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col11a2Q64739 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col11a2Q64739 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col11a2Q64739 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col11a2Q64739 Gm16202-201ENSMUST00000117532 544 ntBASIC16.77■□□□□ 0.28
Col11a2Q64739 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Col11a2Q64739 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col11a2Q64739 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col11a2Q64739 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
Col11a2Q64739 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col11a2Q64739 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col11a2Q64739 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col11a2Q64739 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC16.76■□□□□ 0.27
Col11a2Q64739 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col11a2Q64739 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC16.76■□□□□ 0.27
Col11a2Q64739 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Col11a2Q64739 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col11a2Q64739 Gm4819-201ENSMUST00000182170 1009 ntBASIC16.76■□□□□ 0.27
Col11a2Q64739 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC16.76■□□□□ 0.27
Col11a2Q64739 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC16.76■□□□□ 0.27
Col11a2Q64739 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC16.76■□□□□ 0.27
Col11a2Q64739 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col11a2Q64739 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col11a2Q64739 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col11a2Q64739 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col11a2Q64739 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col11a2Q64739 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col11a2Q64739 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col11a2Q64739 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col11a2Q64739 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Col11a2Q64739 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col11a2Q64739 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col11a2Q64739 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col11a2Q64739 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col11a2Q64739 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col11a2Q64739 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col11a2Q64739 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col11a2Q64739 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col11a2Q64739 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC16.76■□□□□ 0.27
Col11a2Q64739 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Col11a2Q64739 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col11a2Q64739 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC16.76■□□□□ 0.27
Col11a2Q64739 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.76■□□□□ 0.27
Col11a2Q64739 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC16.76■□□□□ 0.27
Col11a2Q64739 Gm37489-201ENSMUST00000191883 159 ntBASIC16.76■□□□□ 0.27
Col11a2Q64739 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Col11a2Q64739 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col11a2Q64739 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.76■□□□□ 0.27
Col11a2Q64739 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.76■□□□□ 0.27
Col11a2Q64739 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Col11a2Q64739 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col11a2Q64739 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a2Q64739 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Col11a2Q64739 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a2Q64739 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a2Q64739 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a2Q64739 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a2Q64739 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a2Q64739 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Col11a2Q64739 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a2Q64739 Gm43579-201ENSMUST00000202387 1307 ntBASIC16.75■□□□□ 0.27
Col11a2Q64739 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a2Q64739 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a2Q64739 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC16.75■□□□□ 0.27
Col11a2Q64739 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC16.75■□□□□ 0.27
Col11a2Q64739 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a2Q64739 Nsd1-205ENSMUST00000224693 852 ntBASIC16.75■□□□□ 0.27
Col11a2Q64739 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a2Q64739 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Col11a2Q64739 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a2Q64739 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a2Q64739 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.75■□□□□ 0.27
Col11a2Q64739 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a2Q64739 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a2Q64739 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a2Q64739 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col11a2Q64739 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col11a2Q64739 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Col11a2Q64739 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.74■□□□□ 0.27
Col11a2Q64739 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC16.74■□□□□ 0.27
Col11a2Q64739 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col11a2Q64739 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col11a2Q64739 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col11a2Q64739 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC16.74■□□□□ 0.27
Col11a2Q64739 Gm18244-201ENSMUST00000219747 1566 ntBASIC16.74■□□□□ 0.27
Col11a2Q64739 Gm11439-201ENSMUST00000118598 409 ntBASIC16.74■□□□□ 0.27
Col11a2Q64739 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC16.74■□□□□ 0.27
Col11a2Q64739 Gm43138-201ENSMUST00000199123 708 ntBASIC16.74■□□□□ 0.27
Col11a2Q64739 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC16.74■□□□□ 0.27
Col11a2Q64739 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col11a2Q64739 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col11a2Q64739 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
Col11a2Q64739 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.74■□□□□ 0.27
Col11a2Q64739 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col11a2Q64739 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms