Protein–RNA interactions for Protein: Q62225

Cish, Cytokine-inducible SH2-containing protein, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CishQ62225 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CishQ62225 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CishQ62225 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CishQ62225 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CishQ62225 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CishQ62225 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CishQ62225 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CishQ62225 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CishQ62225 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CishQ62225 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CishQ62225 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CishQ62225 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CishQ62225 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CishQ62225 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CishQ62225 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CishQ62225 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CishQ62225 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CishQ62225 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CishQ62225 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CishQ62225 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CishQ62225 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CishQ62225 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CishQ62225 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
CishQ62225 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CishQ62225 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CishQ62225 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CishQ62225 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CishQ62225 Gm27989-201ENSMUST00000184721 107 ntBASIC13.51□□□□□ -0.25
CishQ62225 Gm20949-201ENSMUST00000206478 952 ntBASIC13.51□□□□□ -0.25
CishQ62225 Gm7775-201ENSMUST00000218871 853 ntBASIC13.51□□□□□ -0.25
CishQ62225 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CishQ62225 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CishQ62225 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CishQ62225 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CishQ62225 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
CishQ62225 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CishQ62225 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CishQ62225 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CishQ62225 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CishQ62225 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CishQ62225 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CishQ62225 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CishQ62225 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CishQ62225 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CishQ62225 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CishQ62225 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CishQ62225 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CishQ62225 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.5□□□□□ -0.25
CishQ62225 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CishQ62225 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CishQ62225 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CishQ62225 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CishQ62225 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CishQ62225 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CishQ62225 Gm12151-201ENSMUST00000121374 290 ntBASIC13.5□□□□□ -0.25
CishQ62225 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.5□□□□□ -0.25
CishQ62225 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CishQ62225 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CishQ62225 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CishQ62225 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CishQ62225 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CishQ62225 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CishQ62225 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CishQ62225 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CishQ62225 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CishQ62225 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CishQ62225 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CishQ62225 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CishQ62225 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CishQ62225 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CishQ62225 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CishQ62225 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CishQ62225 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CishQ62225 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CishQ62225 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CishQ62225 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CishQ62225 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CishQ62225 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CishQ62225 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.49□□□□□ -0.25
CishQ62225 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CishQ62225 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CishQ62225 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CishQ62225 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.49□□□□□ -0.25
CishQ62225 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CishQ62225 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.49□□□□□ -0.25
CishQ62225 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
CishQ62225 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.49□□□□□ -0.25
CishQ62225 Gm25925-201ENSMUST00000158314 306 ntBASIC13.49□□□□□ -0.25
CishQ62225 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.49□□□□□ -0.25
CishQ62225 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.49□□□□□ -0.25
CishQ62225 Mir8102-201ENSMUST00000184148 139 ntBASIC13.49□□□□□ -0.25
CishQ62225 Gm43703-201ENSMUST00000200523 763 ntBASIC13.49□□□□□ -0.25
CishQ62225 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.49□□□□□ -0.25
CishQ62225 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CishQ62225 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.49□□□□□ -0.25
CishQ62225 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.49□□□□□ -0.25
CishQ62225 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CishQ62225 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.49□□□□□ -0.25
CishQ62225 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CishQ62225 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms