Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VcanQ62059 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.03□□□□□ -0.32
VcanQ62059 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VcanQ62059 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
VcanQ62059 Gm14665-201ENSMUST00000122294 557 ntBASIC13.03□□□□□ -0.32
VcanQ62059 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VcanQ62059 Gm27438-201ENSMUST00000183480 110 ntBASIC13.03□□□□□ -0.32
VcanQ62059 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VcanQ62059 Gm37497-201ENSMUST00000195830 798 ntBASIC13.03□□□□□ -0.32
VcanQ62059 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.03□□□□□ -0.32
VcanQ62059 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VcanQ62059 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VcanQ62059 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VcanQ62059 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VcanQ62059 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
VcanQ62059 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
VcanQ62059 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
VcanQ62059 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VcanQ62059 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VcanQ62059 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VcanQ62059 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
VcanQ62059 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
VcanQ62059 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VcanQ62059 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VcanQ62059 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.02□□□□□ -0.32
VcanQ62059 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.02□□□□□ -0.32
VcanQ62059 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.02□□□□□ -0.32
VcanQ62059 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
VcanQ62059 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
VcanQ62059 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VcanQ62059 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
VcanQ62059 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VcanQ62059 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.02□□□□□ -0.33
VcanQ62059 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VcanQ62059 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
VcanQ62059 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VcanQ62059 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.02□□□□□ -0.33
VcanQ62059 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VcanQ62059 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
VcanQ62059 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VcanQ62059 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VcanQ62059 Gm24830-201ENSMUST00000102024 166 ntBASIC13.02□□□□□ -0.33
VcanQ62059 Gm13570-201ENSMUST00000140763 309 ntBASIC13.02□□□□□ -0.33
VcanQ62059 Gm25890-201ENSMUST00000177643 165 ntBASIC13.02□□□□□ -0.33
VcanQ62059 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.02□□□□□ -0.33
VcanQ62059 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.02□□□□□ -0.33
VcanQ62059 Gm22614-201ENSMUST00000178300 165 ntBASIC13.02□□□□□ -0.33
VcanQ62059 Gm6222-202ENSMUST00000182143 629 ntBASIC13.02□□□□□ -0.33
VcanQ62059 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.02□□□□□ -0.33
VcanQ62059 Gm22042-201ENSMUST00000082989 165 ntBASIC13.02□□□□□ -0.33
VcanQ62059 Gm26232-201ENSMUST00000083360 166 ntBASIC13.02□□□□□ -0.33
VcanQ62059 Gm24136-201ENSMUST00000083374 165 ntBASIC13.02□□□□□ -0.33
VcanQ62059 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.02□□□□□ -0.33
VcanQ62059 Gm26110-201ENSMUST00000083971 165 ntBASIC13.02□□□□□ -0.33
VcanQ62059 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VcanQ62059 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VcanQ62059 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VcanQ62059 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VcanQ62059 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
VcanQ62059 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VcanQ62059 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VcanQ62059 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VcanQ62059 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.02□□□□□ -0.33
VcanQ62059 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VcanQ62059 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
VcanQ62059 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.01□□□□□ -0.33
VcanQ62059 Gm12217-201ENSMUST00000118858 696 ntBASIC13.01□□□□□ -0.33
VcanQ62059 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.01□□□□□ -0.33
VcanQ62059 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
VcanQ62059 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
VcanQ62059 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.01□□□□□ -0.33
VcanQ62059 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VcanQ62059 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VcanQ62059 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VcanQ62059 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.01□□□□□ -0.33
VcanQ62059 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VcanQ62059 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
VcanQ62059 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
VcanQ62059 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VcanQ62059 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VcanQ62059 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VcanQ62059 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.01□□□□□ -0.33
VcanQ62059 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VcanQ62059 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.01□□□□□ -0.33
VcanQ62059 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VcanQ62059 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.01□□□□□ -0.33
VcanQ62059 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
VcanQ62059 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
VcanQ62059 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.01□□□□□ -0.33
VcanQ62059 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VcanQ62059 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VcanQ62059 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
VcanQ62059 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VcanQ62059 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VcanQ62059 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
VcanQ62059 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VcanQ62059 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
VcanQ62059 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VcanQ62059 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VcanQ62059 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms