Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox17Q61473 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox17Q61473 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox17Q61473 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox17Q61473 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox17Q61473 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Sox17Q61473 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox17Q61473 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox17Q61473 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox17Q61473 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox17Q61473 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox17Q61473 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox17Q61473 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox17Q61473 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox17Q61473 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Sox17Q61473 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox17Q61473 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox17Q61473 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox17Q61473 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox17Q61473 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.3□□□□□ -0.28
Sox17Q61473 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox17Q61473 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox17Q61473 Gm14859-201ENSMUST00000117752 357 ntBASIC13.3□□□□□ -0.28
Sox17Q61473 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox17Q61473 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox17Q61473 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Sox17Q61473 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox17Q61473 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.3□□□□□ -0.28
Sox17Q61473 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox17Q61473 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox17Q61473 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox17Q61473 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox17Q61473 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox17Q61473 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox17Q61473 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox17Q61473 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.3□□□□□ -0.28
Sox17Q61473 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Sox17Q61473 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sox17Q61473 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox17Q61473 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox17Q61473 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox17Q61473 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.29□□□□□ -0.28
Sox17Q61473 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox17Q61473 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Sox17Q61473 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox17Q61473 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.29□□□□□ -0.28
Sox17Q61473 Mir7071-201ENSMUST00000184847 69 ntBASIC13.29□□□□□ -0.28
Sox17Q61473 Gm37230-201ENSMUST00000194491 818 ntBASIC13.29□□□□□ -0.28
Sox17Q61473 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox17Q61473 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.29□□□□□ -0.28
Sox17Q61473 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.29□□□□□ -0.28
Sox17Q61473 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox17Q61473 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox17Q61473 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox17Q61473 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.29□□□□□ -0.28
Sox17Q61473 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox17Q61473 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox17Q61473 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox17Q61473 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sox17Q61473 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sox17Q61473 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.29□□□□□ -0.28
Sox17Q61473 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox17Q61473 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
Sox17Q61473 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox17Q61473 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox17Q61473 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox17Q61473 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox17Q61473 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox17Q61473 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox17Q61473 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox17Q61473 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sox17Q61473 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox17Q61473 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.28□□□□□ -0.28
Sox17Q61473 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox17Q61473 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox17Q61473 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Sox17Q61473 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.28□□□□□ -0.28
Sox17Q61473 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox17Q61473 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sox17Q61473 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox17Q61473 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox17Q61473 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox17Q61473 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox17Q61473 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.28□□□□□ -0.28
Sox17Q61473 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox17Q61473 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox17Q61473 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox17Q61473 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox17Q61473 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sox17Q61473 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox17Q61473 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox17Q61473 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox17Q61473 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox17Q61473 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Sox17Q61473 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Sox17Q61473 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.28
Sox17Q61473 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.27□□□□□ -0.28
Sox17Q61473 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox17Q61473 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox17Q61473 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms