Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vsx2Q61412 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vsx2Q61412 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vsx2Q61412 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vsx2Q61412 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Vsx2Q61412 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Vsx2Q61412 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vsx2Q61412 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vsx2Q61412 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vsx2Q61412 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vsx2Q61412 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.84□□□□□ -0.19
Vsx2Q61412 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.84□□□□□ -0.19
Vsx2Q61412 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vsx2Q61412 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.84□□□□□ -0.19
Vsx2Q61412 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Vsx2Q61412 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vsx2Q61412 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vsx2Q61412 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Vsx2Q61412 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vsx2Q61412 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vsx2Q61412 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vsx2Q61412 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vsx2Q61412 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vsx2Q61412 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vsx2Q61412 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vsx2Q61412 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vsx2Q61412 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Vsx2Q61412 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vsx2Q61412 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.19
Vsx2Q61412 Acot6-202ENSMUST00000222921 3622 ntBASIC13.83□□□□□ -0.19
Vsx2Q61412 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vsx2Q61412 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.83□□□□□ -0.19
Vsx2Q61412 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vsx2Q61412 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vsx2Q61412 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vsx2Q61412 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Vsx2Q61412 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Vsx2Q61412 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Vsx2Q61412 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vsx2Q61412 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vsx2Q61412 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.83□□□□□ -0.2
Vsx2Q61412 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vsx2Q61412 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.83□□□□□ -0.2
Vsx2Q61412 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Vsx2Q61412 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.83□□□□□ -0.2
Vsx2Q61412 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vsx2Q61412 Mir6956-201ENSMUST00000183598 62 ntBASIC13.83□□□□□ -0.2
Vsx2Q61412 Gm18049-201ENSMUST00000208909 581 ntBASIC13.83□□□□□ -0.2
Vsx2Q61412 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vsx2Q61412 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.83□□□□□ -0.2
Vsx2Q61412 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.83□□□□□ -0.2
Vsx2Q61412 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vsx2Q61412 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vsx2Q61412 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vsx2Q61412 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vsx2Q61412 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.83□□□□□ -0.2
Vsx2Q61412 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vsx2Q61412 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Vsx2Q61412 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vsx2Q61412 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vsx2Q61412 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Vsx2Q61412 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vsx2Q61412 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vsx2Q61412 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vsx2Q61412 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vsx2Q61412 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vsx2Q61412 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vsx2Q61412 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vsx2Q61412 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.82□□□□□ -0.2
Vsx2Q61412 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vsx2Q61412 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vsx2Q61412 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Vsx2Q61412 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Vsx2Q61412 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vsx2Q61412 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vsx2Q61412 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vsx2Q61412 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vsx2Q61412 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vsx2Q61412 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vsx2Q61412 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.82□□□□□ -0.2
Vsx2Q61412 Gm22175-201ENSMUST00000175007 78 ntBASIC13.82□□□□□ -0.2
Vsx2Q61412 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.82□□□□□ -0.2
Vsx2Q61412 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.82□□□□□ -0.2
Vsx2Q61412 Gm27430-201ENSMUST00000184585 107 ntBASIC13.82□□□□□ -0.2
Vsx2Q61412 Gm44333-201ENSMUST00000197168 107 ntBASIC13.82□□□□□ -0.2
Vsx2Q61412 Olfr286-202ENSMUST00000205305 969 ntBASIC13.82□□□□□ -0.2
Vsx2Q61412 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.82□□□□□ -0.2
Vsx2Q61412 Gm9182-201ENSMUST00000217829 639 ntBASIC13.82□□□□□ -0.2
Vsx2Q61412 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vsx2Q61412 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vsx2Q61412 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vsx2Q61412 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Vsx2Q61412 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vsx2Q61412 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vsx2Q61412 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vsx2Q61412 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vsx2Q61412 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vsx2Q61412 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Vsx2Q61412 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.82□□□□□ -0.2
Vsx2Q61412 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms