Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Six4Q61321 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six4Q61321 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six4Q61321 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.29□□□□□ -0.12
Six4Q61321 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Six4Q61321 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Six4Q61321 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six4Q61321 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Six4Q61321 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six4Q61321 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Six4Q61321 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six4Q61321 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six4Q61321 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six4Q61321 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six4Q61321 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six4Q61321 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.28□□□□□ -0.12
Six4Q61321 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six4Q61321 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Six4Q61321 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.28□□□□□ -0.12
Six4Q61321 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.28□□□□□ -0.12
Six4Q61321 Gm33320-201ENSMUST00000192232 530 ntBASIC14.28□□□□□ -0.12
Six4Q61321 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six4Q61321 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six4Q61321 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six4Q61321 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six4Q61321 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six4Q61321 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Six4Q61321 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six4Q61321 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six4Q61321 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six4Q61321 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.28□□□□□ -0.12
Six4Q61321 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six4Q61321 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Six4Q61321 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Six4Q61321 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.27□□□□□ -0.12
Six4Q61321 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Six4Q61321 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Six4Q61321 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Six4Q61321 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Six4Q61321 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.27□□□□□ -0.12
Six4Q61321 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Six4Q61321 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Six4Q61321 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Six4Q61321 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Six4Q61321 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Six4Q61321 Gm15460-201ENSMUST00000118147 391 ntBASIC14.27□□□□□ -0.13
Six4Q61321 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Six4Q61321 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Six4Q61321 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.27□□□□□ -0.13
Six4Q61321 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Six4Q61321 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Six4Q61321 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Six4Q61321 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.27□□□□□ -0.13
Six4Q61321 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Six4Q61321 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Six4Q61321 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Six4Q61321 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Six4Q61321 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.27□□□□□ -0.13
Six4Q61321 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Six4Q61321 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Six4Q61321 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Six4Q61321 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Six4Q61321 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Six4Q61321 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.27□□□□□ -0.13
Six4Q61321 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Six4Q61321 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Six4Q61321 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Six4Q61321 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Six4Q61321 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Six4Q61321 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 Gm37714-201ENSMUST00000194742 342 ntBASIC14.26□□□□□ -0.13
Six4Q61321 Gm18027-201ENSMUST00000218947 619 ntBASIC14.26□□□□□ -0.13
Six4Q61321 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Six4Q61321 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms