Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfaip3Q60769 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfaip3Q60769 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfaip3Q60769 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Tnfaip3Q60769 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.34□□□□□ -0.27
Tnfaip3Q60769 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfaip3Q60769 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfaip3Q60769 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Tnfaip3Q60769 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfaip3Q60769 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfaip3Q60769 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfaip3Q60769 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfaip3Q60769 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tnfaip3Q60769 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tnfaip3Q60769 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfaip3Q60769 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfaip3Q60769 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfaip3Q60769 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfaip3Q60769 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfaip3Q60769 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Tnfaip3Q60769 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfaip3Q60769 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfaip3Q60769 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfaip3Q60769 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Tnfaip3Q60769 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.33□□□□□ -0.28
Tnfaip3Q60769 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Tnfaip3Q60769 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.33□□□□□ -0.28
Tnfaip3Q60769 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.33□□□□□ -0.28
Tnfaip3Q60769 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.33□□□□□ -0.28
Tnfaip3Q60769 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfaip3Q60769 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfaip3Q60769 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfaip3Q60769 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.33□□□□□ -0.28
Tnfaip3Q60769 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfaip3Q60769 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfaip3Q60769 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfaip3Q60769 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfaip3Q60769 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfaip3Q60769 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfaip3Q60769 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfaip3Q60769 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfaip3Q60769 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Tnfaip3Q60769 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Tnfaip3Q60769 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.32□□□□□ -0.28
Tnfaip3Q60769 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.32□□□□□ -0.28
Tnfaip3Q60769 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.32□□□□□ -0.28
Tnfaip3Q60769 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Gm27838-201ENSMUST00000184829 128 ntBASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Gm43703-201ENSMUST00000200523 763 ntBASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfaip3Q60769 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfaip3Q60769 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Tnfaip3Q60769 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfaip3Q60769 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.31□□□□□ -0.28
Tnfaip3Q60769 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Tnfaip3Q60769 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfaip3Q60769 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfaip3Q60769 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.31□□□□□ -0.28
Tnfaip3Q60769 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfaip3Q60769 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfaip3Q60769 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfaip3Q60769 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Tnfaip3Q60769 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfaip3Q60769 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.31□□□□□ -0.28
Tnfaip3Q60769 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfaip3Q60769 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfaip3Q60769 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Tnfaip3Q60769 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfaip3Q60769 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfaip3Q60769 Gm14719-201ENSMUST00000121891 340 ntBASIC13.31□□□□□ -0.28
Tnfaip3Q60769 Gm15487-201ENSMUST00000122373 465 ntBASIC13.31□□□□□ -0.28
Tnfaip3Q60769 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Tnfaip3Q60769 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms