Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spire1Q52KF3 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spire1Q52KF3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spire1Q52KF3 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spire1Q52KF3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spire1Q52KF3 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spire1Q52KF3 Efs-202ENSMUST00000227037 2540 ntBASIC14.39□□□□□ -0.11
Spire1Q52KF3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spire1Q52KF3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spire1Q52KF3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Spire1Q52KF3 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spire1Q52KF3 Gm4984-201ENSMUST00000115987 360 ntBASIC14.39□□□□□ -0.11
Spire1Q52KF3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.39□□□□□ -0.11
Spire1Q52KF3 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spire1Q52KF3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spire1Q52KF3 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.39□□□□□ -0.11
Spire1Q52KF3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.39□□□□□ -0.11
Spire1Q52KF3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Spire1Q52KF3 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.39□□□□□ -0.11
Spire1Q52KF3 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spire1Q52KF3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spire1Q52KF3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spire1Q52KF3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Spire1Q52KF3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spire1Q52KF3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.39□□□□□ -0.11
Spire1Q52KF3 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spire1Q52KF3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Spire1Q52KF3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spire1Q52KF3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.38□□□□□ -0.11
Spire1Q52KF3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spire1Q52KF3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Spire1Q52KF3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spire1Q52KF3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Spire1Q52KF3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spire1Q52KF3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Spire1Q52KF3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spire1Q52KF3 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spire1Q52KF3 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spire1Q52KF3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spire1Q52KF3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spire1Q52KF3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spire1Q52KF3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spire1Q52KF3 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Spire1Q52KF3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Spire1Q52KF3 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spire1Q52KF3 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Spire1Q52KF3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.38□□□□□ -0.11
Spire1Q52KF3 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Spire1Q52KF3 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spire1Q52KF3 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.38□□□□□ -0.11
Spire1Q52KF3 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Spire1Q52KF3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spire1Q52KF3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spire1Q52KF3 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spire1Q52KF3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spire1Q52KF3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spire1Q52KF3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spire1Q52KF3 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.37□□□□□ -0.11
Spire1Q52KF3 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Spire1Q52KF3 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.37□□□□□ -0.11
Spire1Q52KF3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.37□□□□□ -0.11
Spire1Q52KF3 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spire1Q52KF3 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.37□□□□□ -0.11
Spire1Q52KF3 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.37□□□□□ -0.11
Spire1Q52KF3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Spire1Q52KF3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Spire1Q52KF3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Spire1Q52KF3 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms