Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Gm11793-201ENSMUST00000120433 981 ntBASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Gm13385-201ENSMUST00000121089 220 ntBASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.15□□□□□ -0.14
Fam196aQ3USH1 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Gm27682-201ENSMUST00000183930 110 ntBASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Gm43133-201ENSMUST00000197472 463 ntBASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Gm45865-201ENSMUST00000211815 945 ntBASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Fam196aQ3USH1 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
Fam196aQ3USH1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fam196aQ3USH1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Proscos-202ENSMUST00000178990 666 ntBASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Gm37259-201ENSMUST00000193903 849 ntBASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Olfr284-202ENSMUST00000206647 966 ntBASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Gm5363-201ENSMUST00000211927 938 ntBASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Gm18027-201ENSMUST00000218947 619 ntBASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fam196aQ3USH1 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fam196aQ3USH1 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Fam196aQ3USH1 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fam196aQ3USH1 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.13□□□□□ -0.15
Fam196aQ3USH1 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fam196aQ3USH1 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fam196aQ3USH1 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.13□□□□□ -0.15
Fam196aQ3USH1 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fam196aQ3USH1 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fam196aQ3USH1 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.13□□□□□ -0.15
Fam196aQ3USH1 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fam196aQ3USH1 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.13□□□□□ -0.15
Fam196aQ3USH1 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fam196aQ3USH1 Gm24420-201ENSMUST00000176676 59 ntBASIC14.13□□□□□ -0.15
Fam196aQ3USH1 Gm2383-201ENSMUST00000181461 807 ntBASIC14.13□□□□□ -0.15
Fam196aQ3USH1 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.13□□□□□ -0.15
Fam196aQ3USH1 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.13□□□□□ -0.15
Fam196aQ3USH1 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.13□□□□□ -0.15
Fam196aQ3USH1 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.13□□□□□ -0.15
Fam196aQ3USH1 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fam196aQ3USH1 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Fam196aQ3USH1 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fam196aQ3USH1 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fam196aQ3USH1 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fam196aQ3USH1 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fam196aQ3USH1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.13□□□□□ -0.15
Fam196aQ3USH1 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fam196aQ3USH1 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fam196aQ3USH1 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms