Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col5a2Q3U962 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col5a2Q3U962 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col5a2Q3U962 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.58■□□□□ 0.24
Col5a2Q3U962 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col5a2Q3U962 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col5a2Q3U962 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col5a2Q3U962 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Col5a2Q3U962 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col5a2Q3U962 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.58■□□□□ 0.24
Col5a2Q3U962 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col5a2Q3U962 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col5a2Q3U962 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col5a2Q3U962 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC16.57■□□□□ 0.24
Col5a2Q3U962 Gm12241-201ENSMUST00000118330 726 ntBASIC16.57■□□□□ 0.24
Col5a2Q3U962 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Col5a2Q3U962 Gm12176-201ENSMUST00000121420 875 ntBASIC16.57■□□□□ 0.24
Col5a2Q3U962 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col5a2Q3U962 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC16.57■□□□□ 0.24
Col5a2Q3U962 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC16.57■□□□□ 0.24
Col5a2Q3U962 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col5a2Q3U962 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col5a2Q3U962 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Col5a2Q3U962 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col5a2Q3U962 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col5a2Q3U962 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col5a2Q3U962 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col5a2Q3U962 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col5a2Q3U962 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Col5a2Q3U962 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col5a2Q3U962 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col5a2Q3U962 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16.57■□□□□ 0.24
Col5a2Q3U962 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.57■□□□□ 0.24
Col5a2Q3U962 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.56■□□□□ 0.24
Col5a2Q3U962 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col5a2Q3U962 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col5a2Q3U962 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col5a2Q3U962 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col5a2Q3U962 Gm24255-201ENSMUST00000104481 128 ntBASIC16.56■□□□□ 0.24
Col5a2Q3U962 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col5a2Q3U962 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Col5a2Q3U962 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col5a2Q3U962 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col5a2Q3U962 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col5a2Q3U962 Mir5132-201ENSMUST00000175166 71 ntBASIC16.56■□□□□ 0.24
Col5a2Q3U962 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col5a2Q3U962 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC16.56■□□□□ 0.24
Col5a2Q3U962 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC16.56■□□□□ 0.24
Col5a2Q3U962 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC16.56■□□□□ 0.24
Col5a2Q3U962 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col5a2Q3U962 Gm18753-201ENSMUST00000201000 566 ntBASIC16.56■□□□□ 0.24
Col5a2Q3U962 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col5a2Q3U962 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col5a2Q3U962 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col5a2Q3U962 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col5a2Q3U962 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col5a2Q3U962 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col5a2Q3U962 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col5a2Q3U962 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Col5a2Q3U962 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col5a2Q3U962 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.56■□□□□ 0.24
Col5a2Q3U962 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col5a2Q3U962 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col5a2Q3U962 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col5a2Q3U962 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col5a2Q3U962 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col5a2Q3U962 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col5a2Q3U962 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col5a2Q3U962 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col5a2Q3U962 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col5a2Q3U962 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC16.55■□□□□ 0.24
Col5a2Q3U962 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC16.55■□□□□ 0.24
Col5a2Q3U962 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC16.55■□□□□ 0.24
Col5a2Q3U962 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col5a2Q3U962 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col5a2Q3U962 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col5a2Q3U962 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col5a2Q3U962 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col5a2Q3U962 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col5a2Q3U962 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col5a2Q3U962 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col5a2Q3U962 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Col5a2Q3U962 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col5a2Q3U962 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col5a2Q3U962 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Col5a2Q3U962 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col5a2Q3U962 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Col5a2Q3U962 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Col5a2Q3U962 Gm11400-201ENSMUST00000120853 1214 ntBASIC16.54■□□□□ 0.24
Col5a2Q3U962 Gm11658-201ENSMUST00000120913 1008 ntBASIC16.54■□□□□ 0.24
Col5a2Q3U962 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
Col5a2Q3U962 Gm2467-201ENSMUST00000182266 1010 ntBASIC16.54■□□□□ 0.24
Col5a2Q3U962 Gm6981-201ENSMUST00000182467 1008 ntBASIC16.54■□□□□ 0.24
Col5a2Q3U962 Itm2b-204ENSMUST00000228637 783 ntBASIC16.54■□□□□ 0.24
Col5a2Q3U962 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col5a2Q3U962 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col5a2Q3U962 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col5a2Q3U962 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col5a2Q3U962 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Col5a2Q3U962 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms