Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.3□□□□□ -0.44
Q3U1D9 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.3□□□□□ -0.44
Q3U1D9 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q3U1D9 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q3U1D9 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q3U1D9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q3U1D9 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.29□□□□□ -0.44
Q3U1D9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.29□□□□□ -0.44
Q3U1D9 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q3U1D9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Q3U1D9 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q3U1D9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Q3U1D9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Q3U1D9 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q3U1D9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q3U1D9 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q3U1D9 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q3U1D9 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q3U1D9 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Q3U1D9 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Q3U1D9 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Q3U1D9 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.29□□□□□ -0.44
Q3U1D9 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Q3U1D9 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.29□□□□□ -0.44
Q3U1D9 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.29□□□□□ -0.44
Q3U1D9 Gm37917-201ENSMUST00000194711 392 ntBASIC12.29□□□□□ -0.44
Q3U1D9 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.29□□□□□ -0.44
Q3U1D9 Gm9794-201ENSMUST00000202370 423 ntBASIC12.29□□□□□ -0.44
Q3U1D9 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Q3U1D9 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.29□□□□□ -0.44
Q3U1D9 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.29□□□□□ -0.44
Q3U1D9 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Q3U1D9 Gm15823-201ENSMUST00000064305 670 ntBASIC12.29□□□□□ -0.44
Q3U1D9 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Q3U1D9 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q3U1D9 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q3U1D9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Q3U1D9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q3U1D9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Q3U1D9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Q3U1D9 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Q3U1D9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Q3U1D9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q3U1D9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q3U1D9 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q3U1D9 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Q3U1D9 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Q3U1D9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Q3U1D9 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Q3U1D9 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.28□□□□□ -0.44
Q3U1D9 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Q3U1D9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Q3U1D9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Q3U1D9 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.28□□□□□ -0.44
Q3U1D9 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.28□□□□□ -0.44
Q3U1D9 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.28□□□□□ -0.44
Q3U1D9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Q3U1D9 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.28□□□□□ -0.44
Q3U1D9 Gm10766-202ENSMUST00000194123 606 ntBASIC12.28□□□□□ -0.44
Q3U1D9 Gm18018-201ENSMUST00000198273 408 ntBASIC12.28□□□□□ -0.44
Q3U1D9 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.28□□□□□ -0.44
Q3U1D9 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.28□□□□□ -0.44
Q3U1D9 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.28□□□□□ -0.44
Q3U1D9 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Q3U1D9 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Q3U1D9 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Q3U1D9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Q3U1D9 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Q3U1D9 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Q3U1D9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Q3U1D9 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Q3U1D9 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Q3U1D9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Q3U1D9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Q3U1D9 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Q3U1D9 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Q3U1D9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Q3U1D9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Q3U1D9 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Q3U1D9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Q3U1D9 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Q3U1D9 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Q3U1D9 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Q3U1D9 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Q3U1D9 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Q3U1D9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Q3U1D9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Q3U1D9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Q3U1D9 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.27□□□□□ -0.45
Q3U1D9 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.27□□□□□ -0.45
Q3U1D9 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Q3U1D9 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.27□□□□□ -0.45
Q3U1D9 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Q3U1D9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.27□□□□□ -0.45
Q3U1D9 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.27□□□□□ -0.45
Q3U1D9 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.27□□□□□ -0.45
Q3U1D9 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.27□□□□□ -0.45
Q3U1D9 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Q3U1D9 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Q3U1D9 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms