Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chrna5Q2MKA5 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chrna5Q2MKA5 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chrna5Q2MKA5 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC16.73■□□□□ 0.27
Chrna5Q2MKA5 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Chrna5Q2MKA5 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Chrna5Q2MKA5 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chrna5Q2MKA5 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chrna5Q2MKA5 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chrna5Q2MKA5 Gm14723-201ENSMUST00000118686 215 ntBASIC16.73■□□□□ 0.27
Chrna5Q2MKA5 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC16.73■□□□□ 0.27
Chrna5Q2MKA5 Proscos-202ENSMUST00000178990 666 ntBASIC16.73■□□□□ 0.27
Chrna5Q2MKA5 Gm27772-201ENSMUST00000184900 187 ntBASIC16.73■□□□□ 0.27
Chrna5Q2MKA5 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chrna5Q2MKA5 AC155237.1-201ENSMUST00000226196 1279 ntBASIC16.73■□□□□ 0.27
Chrna5Q2MKA5 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Chrna5Q2MKA5 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chrna5Q2MKA5 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chrna5Q2MKA5 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chrna5Q2MKA5 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
Chrna5Q2MKA5 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chrna5Q2MKA5 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chrna5Q2MKA5 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Chrna5Q2MKA5 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Gm38223-201ENSMUST00000194484 695 ntBASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Gm6013-201ENSMUST00000212264 699 ntBASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna5Q2MKA5 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Gm15371-201ENSMUST00000117057 784 ntBASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Gm2639-201ENSMUST00000156881 1297 ntBASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Gm38241-201ENSMUST00000192641 898 ntBASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Gm45930-201ENSMUST00000221330 292 ntBASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Gm24526-201ENSMUST00000082921 158 ntBASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chrna5Q2MKA5 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Chrna5Q2MKA5 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Chrna5Q2MKA5 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC16.7■□□□□ 0.26
Chrna5Q2MKA5 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chrna5Q2MKA5 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.7■□□□□ 0.26
Chrna5Q2MKA5 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.7■□□□□ 0.26
Chrna5Q2MKA5 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chrna5Q2MKA5 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.7■□□□□ 0.26
Chrna5Q2MKA5 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chrna5Q2MKA5 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chrna5Q2MKA5 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chrna5Q2MKA5 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms