Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf1Q07802 Gm18062-201ENSMUST00000208020 547 ntBASIC14.36□□□□□ -0.11
Ebf1Q07802 Gm18055-201ENSMUST00000208254 547 ntBASIC14.36□□□□□ -0.11
Ebf1Q07802 Gm18624-201ENSMUST00000220966 658 ntBASIC14.36□□□□□ -0.11
Ebf1Q07802 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf1Q07802 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf1Q07802 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf1Q07802 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf1Q07802 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf1Q07802 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf1Q07802 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.35□□□□□ -0.11
Ebf1Q07802 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.35□□□□□ -0.11
Ebf1Q07802 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Ebf1Q07802 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf1Q07802 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf1Q07802 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf1Q07802 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf1Q07802 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf1Q07802 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.35□□□□□ -0.11
Ebf1Q07802 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf1Q07802 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf1Q07802 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
Ebf1Q07802 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf1Q07802 Gm13829-201ENSMUST00000119600 138 ntBASIC14.35□□□□□ -0.11
Ebf1Q07802 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.35□□□□□ -0.11
Ebf1Q07802 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Ebf1Q07802 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf1Q07802 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf1Q07802 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf1Q07802 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.35□□□□□ -0.11
Ebf1Q07802 AA619741-201ENSMUST00000195095 646 ntBASIC14.35□□□□□ -0.11
Ebf1Q07802 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.35□□□□□ -0.11
Ebf1Q07802 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf1Q07802 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ebf1Q07802 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.35□□□□□ -0.11
Ebf1Q07802 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.35□□□□□ -0.11
Ebf1Q07802 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.35□□□□□ -0.11
Ebf1Q07802 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf1Q07802 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ebf1Q07802 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf1Q07802 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.35□□□□□ -0.11
Ebf1Q07802 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf1Q07802 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ebf1Q07802 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Ebf1Q07802 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf1Q07802 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf1Q07802 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf1Q07802 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf1Q07802 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf1Q07802 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ebf1Q07802 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Ebf1Q07802 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf1Q07802 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf1Q07802 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf1Q07802 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf1Q07802 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.34□□□□□ -0.11
Ebf1Q07802 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf1Q07802 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf1Q07802 Gm11918-201ENSMUST00000121660 179 ntBASIC14.34□□□□□ -0.11
Ebf1Q07802 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf1Q07802 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Ebf1Q07802 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.34□□□□□ -0.11
Ebf1Q07802 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf1Q07802 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf1Q07802 Gm44719-201ENSMUST00000206404 149 ntBASIC14.34□□□□□ -0.11
Ebf1Q07802 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.34□□□□□ -0.11
Ebf1Q07802 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf1Q07802 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.34□□□□□ -0.11
Ebf1Q07802 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.34□□□□□ -0.11
Ebf1Q07802 Gm19220-201ENSMUST00000222682 803 ntBASIC14.34□□□□□ -0.11
Ebf1Q07802 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf1Q07802 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf1Q07802 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf1Q07802 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf1Q07802 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Ebf1Q07802 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf1Q07802 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.34□□□□□ -0.11
Ebf1Q07802 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf1Q07802 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf1Q07802 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf1Q07802 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf1Q07802 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.34□□□□□ -0.11
Ebf1Q07802 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf1Q07802 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf1Q07802 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf1Q07802 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf1Q07802 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ebf1Q07802 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ebf1Q07802 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ebf1Q07802 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ebf1Q07802 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Ebf1Q07802 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Ebf1Q07802 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.33□□□□□ -0.11
Ebf1Q07802 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Ebf1Q07802 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.33□□□□□ -0.12
Ebf1Q07802 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf1Q07802 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.33□□□□□ -0.12
Ebf1Q07802 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf1Q07802 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
Ebf1Q07802 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms