Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox4Q06831 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox4Q06831 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Sox4Q06831 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Sox4Q06831 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sox4Q06831 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Sox4Q06831 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Sox4Q06831 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Sox4Q06831 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sox4Q06831 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.93□□□□□ -0.18
Sox4Q06831 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.93□□□□□ -0.18
Sox4Q06831 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox4Q06831 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox4Q06831 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox4Q06831 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox4Q06831 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Sox4Q06831 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox4Q06831 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox4Q06831 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox4Q06831 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox4Q06831 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox4Q06831 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox4Q06831 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox4Q06831 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox4Q06831 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox4Q06831 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox4Q06831 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox4Q06831 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.92□□□□□ -0.18
Sox4Q06831 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sox4Q06831 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox4Q06831 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox4Q06831 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Sox4Q06831 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox4Q06831 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.92□□□□□ -0.18
Sox4Q06831 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox4Q06831 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox4Q06831 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox4Q06831 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox4Q06831 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox4Q06831 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.92□□□□□ -0.18
Sox4Q06831 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox4Q06831 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.92□□□□□ -0.18
Sox4Q06831 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox4Q06831 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.92□□□□□ -0.18
Sox4Q06831 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.92□□□□□ -0.18
Sox4Q06831 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Sox4Q06831 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Sox4Q06831 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sox4Q06831 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.92□□□□□ -0.18
Sox4Q06831 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.92□□□□□ -0.18
Sox4Q06831 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sox4Q06831 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.92□□□□□ -0.18
Sox4Q06831 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox4Q06831 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Sox4Q06831 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox4Q06831 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox4Q06831 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox4Q06831 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sox4Q06831 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.92□□□□□ -0.18
Sox4Q06831 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox4Q06831 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Sox4Q06831 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.92□□□□□ -0.18
Sox4Q06831 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox4Q06831 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox4Q06831 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox4Q06831 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox4Q06831 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox4Q06831 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Sox4Q06831 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox4Q06831 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox4Q06831 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox4Q06831 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Sox4Q06831 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox4Q06831 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.91□□□□□ -0.18
Sox4Q06831 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox4Q06831 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox4Q06831 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Sox4Q06831 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.91□□□□□ -0.18
Sox4Q06831 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox4Q06831 Gm4875-201ENSMUST00000118257 786 ntBASIC13.91□□□□□ -0.18
Sox4Q06831 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox4Q06831 Gm15487-201ENSMUST00000122373 465 ntBASIC13.91□□□□□ -0.18
Sox4Q06831 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.91□□□□□ -0.18
Sox4Q06831 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox4Q06831 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.91□□□□□ -0.18
Sox4Q06831 Gm3436-201ENSMUST00000179930 840 ntBASIC13.91□□□□□ -0.18
Sox4Q06831 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox4Q06831 Mir7684-201ENSMUST00000183858 60 ntBASIC13.91□□□□□ -0.18
Sox4Q06831 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.91□□□□□ -0.18
Sox4Q06831 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.91□□□□□ -0.18
Sox4Q06831 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox4Q06831 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox4Q06831 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox4Q06831 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox4Q06831 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox4Q06831 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox4Q06831 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox4Q06831 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox4Q06831 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Sox4Q06831 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms