Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn1bP97952 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.96□□□□□ -0.34
Scn1bP97952 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Scn1bP97952 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn1bP97952 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn1bP97952 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Scn1bP97952 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Scn1bP97952 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn1bP97952 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Scn1bP97952 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn1bP97952 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.96□□□□□ -0.34
Scn1bP97952 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.95□□□□□ -0.34
Scn1bP97952 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1bP97952 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1bP97952 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Scn1bP97952 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1bP97952 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1bP97952 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.95□□□□□ -0.34
Scn1bP97952 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1bP97952 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1bP97952 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1bP97952 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Scn1bP97952 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1bP97952 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Scn1bP97952 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1bP97952 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1bP97952 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1bP97952 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1bP97952 Gm8097-201ENSMUST00000117903 829 ntBASIC12.95□□□□□ -0.34
Scn1bP97952 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.95□□□□□ -0.34
Scn1bP97952 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1bP97952 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1bP97952 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1bP97952 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1bP97952 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1bP97952 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1bP97952 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1bP97952 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1bP97952 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.95□□□□□ -0.34
Scn1bP97952 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.95□□□□□ -0.34
Scn1bP97952 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1bP97952 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.95□□□□□ -0.34
Scn1bP97952 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.95□□□□□ -0.34
Scn1bP97952 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1bP97952 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1bP97952 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Scn1bP97952 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Scn1bP97952 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1bP97952 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1bP97952 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Scn1bP97952 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Scn1bP97952 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.94□□□□□ -0.34
Scn1bP97952 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.94□□□□□ -0.34
Scn1bP97952 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.94□□□□□ -0.34
Scn1bP97952 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Scn1bP97952 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.94□□□□□ -0.34
Scn1bP97952 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Gm7977-201ENSMUST00000193787 748 ntBASIC12.94□□□□□ -0.34
Scn1bP97952 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.94□□□□□ -0.34
Scn1bP97952 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.94□□□□□ -0.34
Scn1bP97952 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Scn1bP97952 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1bP97952 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1bP97952 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1bP97952 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Scn1bP97952 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Scn1bP97952 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1bP97952 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1bP97952 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.93□□□□□ -0.34
Scn1bP97952 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1bP97952 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1bP97952 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms