Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx3-2P97503 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Nkx3-2P97503 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nkx3-2P97503 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx3-2P97503 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Nkx3-2P97503 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx3-2P97503 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx3-2P97503 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx3-2P97503 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx3-2P97503 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx3-2P97503 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx3-2P97503 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx3-2P97503 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.4□□□□□ -0.26
Nkx3-2P97503 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.4□□□□□ -0.26
Nkx3-2P97503 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.4□□□□□ -0.26
Nkx3-2P97503 AA619741-201ENSMUST00000195095 646 ntBASIC13.4□□□□□ -0.26
Nkx3-2P97503 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Dupd1-202ENSMUST00000224735 548 ntBASIC13.4□□□□□ -0.26
Nkx3-2P97503 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.4□□□□□ -0.26
Nkx3-2P97503 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.4□□□□□ -0.26
Nkx3-2P97503 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.4□□□□□ -0.26
Nkx3-2P97503 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx3-2P97503 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Nkx3-2P97503 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Nkx3-2P97503 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.4□□□□□ -0.27
Nkx3-2P97503 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.39□□□□□ -0.27
Nkx3-2P97503 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Gm10275-202ENSMUST00000168697 495 ntBASIC13.39□□□□□ -0.27
Nkx3-2P97503 Gm5866-201ENSMUST00000177881 973 ntBASIC13.39□□□□□ -0.27
Nkx3-2P97503 Gm3436-201ENSMUST00000179930 840 ntBASIC13.39□□□□□ -0.27
Nkx3-2P97503 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.39□□□□□ -0.27
Nkx3-2P97503 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Gm10275-201ENSMUST00000092620 635 ntBASIC13.39□□□□□ -0.27
Nkx3-2P97503 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-2P97503 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms