Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CiitaP79621 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CiitaP79621 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.32■□□□□ 0.04
CiitaP79621 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CiitaP79621 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CiitaP79621 Gm12134-201ENSMUST00000122109 520 ntBASIC15.32■□□□□ 0.04
CiitaP79621 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.32■□□□□ 0.04
CiitaP79621 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CiitaP79621 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.32■□□□□ 0.04
CiitaP79621 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CiitaP79621 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CiitaP79621 Gm28631-201ENSMUST00000190740 334 ntBASIC15.32■□□□□ 0.04
CiitaP79621 Gm5425-201ENSMUST00000214125 459 ntBASIC15.32■□□□□ 0.04
CiitaP79621 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CiitaP79621 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CiitaP79621 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.32■□□□□ 0.04
CiitaP79621 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CiitaP79621 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
CiitaP79621 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CiitaP79621 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
CiitaP79621 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CiitaP79621 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CiitaP79621 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CiitaP79621 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CiitaP79621 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CiitaP79621 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CiitaP79621 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CiitaP79621 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CiitaP79621 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CiitaP79621 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CiitaP79621 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CiitaP79621 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CiitaP79621 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CiitaP79621 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CiitaP79621 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CiitaP79621 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC15.31■□□□□ 0.04
CiitaP79621 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CiitaP79621 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CiitaP79621 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CiitaP79621 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CiitaP79621 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.31■□□□□ 0.04
CiitaP79621 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CiitaP79621 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CiitaP79621 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.31■□□□□ 0.04
CiitaP79621 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CiitaP79621 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CiitaP79621 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CiitaP79621 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CiitaP79621 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CiitaP79621 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CiitaP79621 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CiitaP79621 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CiitaP79621 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CiitaP79621 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CiitaP79621 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CiitaP79621 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CiitaP79621 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CiitaP79621 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CiitaP79621 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.3■□□□□ 0.04
CiitaP79621 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CiitaP79621 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CiitaP79621 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CiitaP79621 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CiitaP79621 Gm42690-201ENSMUST00000197921 1836 ntBASIC15.3■□□□□ 0.04
CiitaP79621 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.3■□□□□ 0.04
CiitaP79621 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.3■□□□□ 0.04
CiitaP79621 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.3■□□□□ 0.04
CiitaP79621 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CiitaP79621 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CiitaP79621 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CiitaP79621 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CiitaP79621 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CiitaP79621 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CiitaP79621 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CiitaP79621 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CiitaP79621 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.29■□□□□ 0.04
CiitaP79621 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CiitaP79621 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.29■□□□□ 0.04
CiitaP79621 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.29■□□□□ 0.04
CiitaP79621 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CiitaP79621 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.29■□□□□ 0.04
CiitaP79621 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CiitaP79621 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CiitaP79621 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CiitaP79621 Gm6912-201ENSMUST00000117218 544 ntBASIC15.29■□□□□ 0.04
CiitaP79621 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.29■□□□□ 0.04
CiitaP79621 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CiitaP79621 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CiitaP79621 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CiitaP79621 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CiitaP79621 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC15.29■□□□□ 0.04
CiitaP79621 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CiitaP79621 Gm45668-201ENSMUST00000211271 493 ntBASIC15.29■□□□□ 0.04
CiitaP79621 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.29■□□□□ 0.04
CiitaP79621 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CiitaP79621 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CiitaP79621 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.29■□□□□ 0.04
CiitaP79621 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CiitaP79621 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CiitaP79621 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms