Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm3P62311 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm3P62311 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm3P62311 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm3P62311 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm3P62311 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.9□□□□□ -0.34
Lsm3P62311 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm3P62311 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm3P62311 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm3P62311 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Lsm3P62311 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm3P62311 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm3P62311 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm3P62311 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm3P62311 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm3P62311 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Lsm3P62311 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Lsm3P62311 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Lsm3P62311 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm3P62311 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm3P62311 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Lsm3P62311 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm3P62311 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Lsm3P62311 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm3P62311 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.89□□□□□ -0.35
Lsm3P62311 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm3P62311 Gm9013-201ENSMUST00000132939 882 ntBASIC12.89□□□□□ -0.35
Lsm3P62311 Gm12497-201ENSMUST00000138778 237 ntBASIC12.89□□□□□ -0.35
Lsm3P62311 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm3P62311 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.89□□□□□ -0.35
Lsm3P62311 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.89□□□□□ -0.35
Lsm3P62311 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Lsm3P62311 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Lsm3P62311 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm3P62311 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm3P62311 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Lsm3P62311 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm3P62311 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm3P62311 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm3P62311 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm3P62311 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm3P62311 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm3P62311 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm3P62311 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm3P62311 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm3P62311 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm3P62311 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
Lsm3P62311 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Lsm3P62311 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm3P62311 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm3P62311 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm3P62311 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm3P62311 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm3P62311 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm3P62311 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Lsm3P62311 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Lsm3P62311 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm3P62311 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm3P62311 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm3P62311 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm3P62311 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm3P62311 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.88□□□□□ -0.35
Lsm3P62311 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.88□□□□□ -0.35
Lsm3P62311 Mir3081-201ENSMUST00000175305 84 ntBASIC12.88□□□□□ -0.35
Lsm3P62311 Gm45328-201ENSMUST00000210942 917 ntBASIC12.88□□□□□ -0.35
Lsm3P62311 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.88□□□□□ -0.35
Lsm3P62311 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm3P62311 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm3P62311 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm3P62311 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm3P62311 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm3P62311 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm3P62311 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm3P62311 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm3P62311 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm3P62311 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm3P62311 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Lsm3P62311 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm3P62311 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm3P62311 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Lsm3P62311 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Lsm3P62311 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm3P62311 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm3P62311 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm3P62311 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm3P62311 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm3P62311 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Lsm3P62311 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm3P62311 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.87□□□□□ -0.35
Lsm3P62311 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm3P62311 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Lsm3P62311 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm3P62311 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm3P62311 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm3P62311 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm3P62311 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm3P62311 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm3P62311 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm3P62311 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.87□□□□□ -0.35
Lsm3P62311 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms