Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fdft1P53798 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fdft1P53798 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.17□□□□□ -0.14
Fdft1P53798 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fdft1P53798 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fdft1P53798 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fdft1P53798 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fdft1P53798 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fdft1P53798 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.16□□□□□ -0.14
Fdft1P53798 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fdft1P53798 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fdft1P53798 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fdft1P53798 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fdft1P53798 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.16□□□□□ -0.14
Fdft1P53798 Gm11745-201ENSMUST00000121669 448 ntBASIC14.16□□□□□ -0.14
Fdft1P53798 Gm11594-201ENSMUST00000122313 162 ntBASIC14.16□□□□□ -0.14
Fdft1P53798 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fdft1P53798 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.16□□□□□ -0.14
Fdft1P53798 Gm18057-201ENSMUST00000208220 503 ntBASIC14.16□□□□□ -0.14
Fdft1P53798 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.16□□□□□ -0.14
Fdft1P53798 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fdft1P53798 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Fdft1P53798 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fdft1P53798 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fdft1P53798 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Fdft1P53798 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Fdft1P53798 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Fdft1P53798 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fdft1P53798 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fdft1P53798 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.16□□□□□ -0.14
Fdft1P53798 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Fdft1P53798 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Fdft1P53798 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fdft1P53798 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fdft1P53798 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Fdft1P53798 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fdft1P53798 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fdft1P53798 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Fdft1P53798 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Fdft1P53798 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fdft1P53798 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fdft1P53798 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.15□□□□□ -0.14
Fdft1P53798 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fdft1P53798 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fdft1P53798 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Fdft1P53798 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Fdft1P53798 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.15□□□□□ -0.14
Fdft1P53798 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.15□□□□□ -0.14
Fdft1P53798 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.15□□□□□ -0.14
Fdft1P53798 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fdft1P53798 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fdft1P53798 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Fdft1P53798 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Fdft1P53798 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Fdft1P53798 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fdft1P53798 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.15□□□□□ -0.14
Fdft1P53798 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Fdft1P53798 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Fdft1P53798 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fdft1P53798 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fdft1P53798 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Fdft1P53798 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Fdft1P53798 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fdft1P53798 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.14□□□□□ -0.15
Fdft1P53798 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fdft1P53798 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.14□□□□□ -0.15
Fdft1P53798 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fdft1P53798 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fdft1P53798 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.14□□□□□ -0.15
Fdft1P53798 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fdft1P53798 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fdft1P53798 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fdft1P53798 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fdft1P53798 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Fdft1P53798 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fdft1P53798 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Fdft1P53798 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.14□□□□□ -0.15
Fdft1P53798 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.14□□□□□ -0.15
Fdft1P53798 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.14□□□□□ -0.15
Fdft1P53798 Rprl2-201ENSMUST00000157150 290 ntBASIC14.14□□□□□ -0.15
Fdft1P53798 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.14□□□□□ -0.15
Fdft1P53798 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.14□□□□□ -0.15
Fdft1P53798 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.14□□□□□ -0.15
Fdft1P53798 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Fdft1P53798 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fdft1P53798 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fdft1P53798 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.14□□□□□ -0.15
Fdft1P53798 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fdft1P53798 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fdft1P53798 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fdft1P53798 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.14□□□□□ -0.15
Fdft1P53798 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Fdft1P53798 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fdft1P53798 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Fdft1P53798 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fdft1P53798 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.13□□□□□ -0.15
Fdft1P53798 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fdft1P53798 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fdft1P53798 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fdft1P53798 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms