Protein–RNA interactions for Protein: P51642

Cntf, Ciliary neurotrophic factor, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CntfP51642 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CntfP51642 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CntfP51642 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CntfP51642 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CntfP51642 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.28□□□□□ -0.28
CntfP51642 Gm9385-201ENSMUST00000117563 472 ntBASIC13.28□□□□□ -0.28
CntfP51642 Gm1401-201ENSMUST00000122048 772 ntBASIC13.28□□□□□ -0.28
CntfP51642 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CntfP51642 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
CntfP51642 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
CntfP51642 Gm9727-201ENSMUST00000161387 555 ntBASIC13.28□□□□□ -0.28
CntfP51642 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CntfP51642 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.28□□□□□ -0.28
CntfP51642 Gm17968-201ENSMUST00000194902 784 ntBASIC13.28□□□□□ -0.28
CntfP51642 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CntfP51642 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CntfP51642 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CntfP51642 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CntfP51642 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CntfP51642 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.28□□□□□ -0.28
CntfP51642 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CntfP51642 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CntfP51642 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CntfP51642 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.28□□□□□ -0.28
CntfP51642 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CntfP51642 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CntfP51642 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CntfP51642 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CntfP51642 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CntfP51642 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CntfP51642 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CntfP51642 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CntfP51642 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CntfP51642 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CntfP51642 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CntfP51642 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
CntfP51642 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CntfP51642 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CntfP51642 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CntfP51642 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CntfP51642 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CntfP51642 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CntfP51642 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
CntfP51642 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CntfP51642 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CntfP51642 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
CntfP51642 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CntfP51642 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
CntfP51642 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CntfP51642 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CntfP51642 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CntfP51642 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.27□□□□□ -0.29
CntfP51642 Gm37230-201ENSMUST00000194491 818 ntBASIC13.27□□□□□ -0.29
CntfP51642 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.27□□□□□ -0.29
CntfP51642 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.27□□□□□ -0.29
CntfP51642 Gm18041-201ENSMUST00000218210 618 ntBASIC13.27□□□□□ -0.29
CntfP51642 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CntfP51642 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CntfP51642 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.27□□□□□ -0.29
CntfP51642 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CntfP51642 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CntfP51642 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CntfP51642 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CntfP51642 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CntfP51642 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CntfP51642 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CntfP51642 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.27□□□□□ -0.29
CntfP51642 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CntfP51642 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CntfP51642 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CntfP51642 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CntfP51642 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CntfP51642 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CntfP51642 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CntfP51642 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CntfP51642 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CntfP51642 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CntfP51642 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CntfP51642 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CntfP51642 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CntfP51642 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CntfP51642 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CntfP51642 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CntfP51642 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.26□□□□□ -0.29
CntfP51642 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.26□□□□□ -0.29
CntfP51642 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CntfP51642 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.26□□□□□ -0.29
CntfP51642 Gm5479-201ENSMUST00000160578 435 ntBASIC13.26□□□□□ -0.29
CntfP51642 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CntfP51642 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CntfP51642 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.26□□□□□ -0.29
CntfP51642 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
CntfP51642 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.26□□□□□ -0.29
CntfP51642 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CntfP51642 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CntfP51642 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.26□□□□□ -0.29
CntfP51642 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.26□□□□□ -0.29
CntfP51642 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CntfP51642 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CntfP51642 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms