Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cd27P41272 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Ptprs-211ENSMUST00000223859 5588 ntBASIC11.35□□□□□ -0.59
Cd27P41272 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Cd27P41272 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Cd27P41272 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.35□□□□□ -0.59
Cd27P41272 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.35□□□□□ -0.59
Cd27P41272 Gm44608-201ENSMUST00000206827 855 ntBASIC11.35□□□□□ -0.59
Cd27P41272 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Cd27P41272 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.35□□□□□ -0.59
Cd27P41272 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cd27P41272 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cd27P41272 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cd27P41272 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cd27P41272 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.35□□□□□ -0.59
Cd27P41272 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.35□□□□□ -0.59
Cd27P41272 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cd27P41272 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Cd27P41272 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cd27P41272 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cd27P41272 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Cd27P41272 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.34□□□□□ -0.59
Cd27P41272 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cd27P41272 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.34□□□□□ -0.59
Cd27P41272 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cd27P41272 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cd27P41272 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cd27P41272 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cd27P41272 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cd27P41272 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cd27P41272 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cd27P41272 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cd27P41272 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cd27P41272 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cd27P41272 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.34□□□□□ -0.59
Cd27P41272 Gm27306-201ENSMUST00000183970 107 ntBASIC11.34□□□□□ -0.59
Cd27P41272 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.34□□□□□ -0.59
Cd27P41272 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.34□□□□□ -0.59
Cd27P41272 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.34□□□□□ -0.59
Cd27P41272 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.34□□□□□ -0.59
Cd27P41272 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cd27P41272 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cd27P41272 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cd27P41272 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cd27P41272 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cd27P41272 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cd27P41272 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cd27P41272 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cd27P41272 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.34□□□□□ -0.59
Cd27P41272 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cd27P41272 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.34□□□□□ -0.59
Cd27P41272 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cd27P41272 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cd27P41272 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cd27P41272 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cd27P41272 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cd27P41272 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cd27P41272 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cd27P41272 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cd27P41272 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cd27P41272 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Cd27P41272 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.33□□□□□ -0.6
Cd27P41272 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Cd27P41272 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cd27P41272 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.33□□□□□ -0.6
Cd27P41272 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms