Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Gm12859-201ENSMUST00000117834 427 ntBASIC11.67□□□□□ -0.54
Cdkn1aP39689 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.67□□□□□ -0.54
Cdkn1aP39689 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.67□□□□□ -0.54
Cdkn1aP39689 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cdkn1aP39689 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.67□□□□□ -0.54
Cdkn1aP39689 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.67□□□□□ -0.54
Cdkn1aP39689 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdkn1aP39689 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdkn1aP39689 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.66□□□□□ -0.54
Cdkn1aP39689 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdkn1aP39689 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.66□□□□□ -0.54
Cdkn1aP39689 Gm21470-201ENSMUST00000187680 696 ntBASIC11.66□□□□□ -0.54
Cdkn1aP39689 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Gm42612-201ENSMUST00000197986 623 ntBASIC11.66□□□□□ -0.54
Cdkn1aP39689 Gm43170-201ENSMUST00000199827 612 ntBASIC11.66□□□□□ -0.54
Cdkn1aP39689 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdkn1aP39689 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.66□□□□□ -0.54
Cdkn1aP39689 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Gm9797-201ENSMUST00000052902 613 ntBASIC11.66□□□□□ -0.54
Cdkn1aP39689 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdkn1aP39689 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.66□□□□□ -0.54
Cdkn1aP39689 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdkn1aP39689 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdkn1aP39689 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms