Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rab5cP35278 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rab5cP35278 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rab5cP35278 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Rab5cP35278 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rab5cP35278 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rab5cP35278 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rab5cP35278 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rab5cP35278 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rab5cP35278 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Rab5cP35278 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rab5cP35278 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Rab5cP35278 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Rab5cP35278 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rab5cP35278 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rab5cP35278 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rab5cP35278 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rab5cP35278 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab5cP35278 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab5cP35278 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab5cP35278 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rab5cP35278 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab5cP35278 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Rab5cP35278 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab5cP35278 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rab5cP35278 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab5cP35278 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Rab5cP35278 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.52□□□□□ -0.57
Rab5cP35278 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rab5cP35278 Rprl3-201ENSMUST00000157400 290 ntBASIC11.52□□□□□ -0.57
Rab5cP35278 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Rab5cP35278 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC11.52□□□□□ -0.57
Rab5cP35278 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rab5cP35278 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.52□□□□□ -0.57
Rab5cP35278 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab5cP35278 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Rab5cP35278 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab5cP35278 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rab5cP35278 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Rab5cP35278 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab5cP35278 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Rab5cP35278 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab5cP35278 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab5cP35278 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rab5cP35278 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab5cP35278 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab5cP35278 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab5cP35278 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rab5cP35278 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Rab5cP35278 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab5cP35278 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rab5cP35278 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab5cP35278 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab5cP35278 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab5cP35278 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rab5cP35278 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Rab5cP35278 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.51□□□□□ -0.57
Rab5cP35278 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rab5cP35278 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rab5cP35278 Gm12497-201ENSMUST00000138778 237 ntBASIC11.51□□□□□ -0.57
Rab5cP35278 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.51□□□□□ -0.57
Rab5cP35278 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.51□□□□□ -0.57
Rab5cP35278 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab5cP35278 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rab5cP35278 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rab5cP35278 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rab5cP35278 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rab5cP35278 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.5□□□□□ -0.57
Rab5cP35278 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rab5cP35278 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rab5cP35278 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms