Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a1P31648 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Slc6a1P31648 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a1P31648 Mir5126-201ENSMUST00000175513 77 ntBASIC12.2□□□□□ -0.46
Slc6a1P31648 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.2□□□□□ -0.46
Slc6a1P31648 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.2□□□□□ -0.46
Slc6a1P31648 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.2□□□□□ -0.46
Slc6a1P31648 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.2□□□□□ -0.46
Slc6a1P31648 Gm18206-201ENSMUST00000207027 926 ntBASIC12.2□□□□□ -0.46
Slc6a1P31648 Gm7506-201ENSMUST00000207758 815 ntBASIC12.2□□□□□ -0.46
Slc6a1P31648 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.2□□□□□ -0.46
Slc6a1P31648 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
Slc6a1P31648 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.2□□□□□ -0.46
Slc6a1P31648 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.2□□□□□ -0.46
Slc6a1P31648 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a1P31648 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a1P31648 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a1P31648 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a1P31648 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a1P31648 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a1P31648 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a1P31648 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.2□□□□□ -0.46
Slc6a1P31648 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.2□□□□□ -0.46
Slc6a1P31648 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a1P31648 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a1P31648 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a1P31648 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a1P31648 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a1P31648 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a1P31648 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Slc6a1P31648 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Slc6a1P31648 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a1P31648 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a1P31648 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a1P31648 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a1P31648 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a1P31648 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.19□□□□□ -0.46
Slc6a1P31648 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a1P31648 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Slc6a1P31648 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Slc6a1P31648 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a1P31648 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a1P31648 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a1P31648 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.19□□□□□ -0.46
Slc6a1P31648 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.19□□□□□ -0.46
Slc6a1P31648 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a1P31648 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a1P31648 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.19□□□□□ -0.46
Slc6a1P31648 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.19□□□□□ -0.46
Slc6a1P31648 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.19□□□□□ -0.46
Slc6a1P31648 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Slc6a1P31648 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a1P31648 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.19□□□□□ -0.46
Slc6a1P31648 AV026068-213ENSMUST00000223675 1171 ntBASIC12.19□□□□□ -0.46
Slc6a1P31648 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a1P31648 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Slc6a1P31648 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Slc6a1P31648 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a1P31648 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a1P31648 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a1P31648 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a1P31648 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a1P31648 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a1P31648 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a1P31648 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a1P31648 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.19□□□□□ -0.46
Slc6a1P31648 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a1P31648 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a1P31648 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a1P31648 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a1P31648 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.18□□□□□ -0.46
Slc6a1P31648 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a1P31648 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a1P31648 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Slc6a1P31648 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.18□□□□□ -0.46
Slc6a1P31648 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a1P31648 Rubie-203ENSMUST00000227803 2430 ntBASIC12.18□□□□□ -0.46
Slc6a1P31648 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Slc6a1P31648 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Slc6a1P31648 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a1P31648 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a1P31648 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Slc6a1P31648 Gm13418-201ENSMUST00000119097 944 ntBASIC12.18□□□□□ -0.46
Slc6a1P31648 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a1P31648 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a1P31648 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.18□□□□□ -0.46
Slc6a1P31648 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Slc6a1P31648 Mir5131-201ENSMUST00000175426 93 ntBASIC12.18□□□□□ -0.46
Slc6a1P31648 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.18□□□□□ -0.46
Slc6a1P31648 Gm6089-201ENSMUST00000197666 938 ntBASIC12.18□□□□□ -0.46
Slc6a1P31648 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.18□□□□□ -0.46
Slc6a1P31648 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a1P31648 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Slc6a1P31648 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.18□□□□□ -0.46
Slc6a1P31648 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a1P31648 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a1P31648 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a1P31648 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a1P31648 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a1P31648 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms