Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vcam1P29533 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcam1P29533 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vcam1P29533 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcam1P29533 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcam1P29533 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.19■□□□□ 0.18
Vcam1P29533 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcam1P29533 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcam1P29533 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.19■□□□□ 0.18
Vcam1P29533 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vcam1P29533 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.19■□□□□ 0.18
Vcam1P29533 Gm27839-201ENSMUST00000184242 106 ntBASIC16.19■□□□□ 0.18
Vcam1P29533 AC125117.1-201ENSMUST00000228121 468 ntBASIC16.19■□□□□ 0.18
Vcam1P29533 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcam1P29533 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcam1P29533 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcam1P29533 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
Vcam1P29533 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcam1P29533 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.19■□□□□ 0.18
Vcam1P29533 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vcam1P29533 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcam1P29533 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcam1P29533 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcam1P29533 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcam1P29533 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcam1P29533 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcam1P29533 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC16.19■□□□□ 0.18
Vcam1P29533 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcam1P29533 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcam1P29533 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcam1P29533 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcam1P29533 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcam1P29533 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcam1P29533 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcam1P29533 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcam1P29533 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcam1P29533 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.18■□□□□ 0.18
Vcam1P29533 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcam1P29533 Mir698-201ENSMUST00000102164 109 ntBASIC16.18■□□□□ 0.18
Vcam1P29533 Gm12390-201ENSMUST00000117897 397 ntBASIC16.18■□□□□ 0.18
Vcam1P29533 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.18■□□□□ 0.18
Vcam1P29533 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC16.18■□□□□ 0.18
Vcam1P29533 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.18■□□□□ 0.18
Vcam1P29533 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.18■□□□□ 0.18
Vcam1P29533 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.18■□□□□ 0.18
Vcam1P29533 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcam1P29533 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Vcam1P29533 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.18■□□□□ 0.18
Vcam1P29533 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.18■□□□□ 0.18
Vcam1P29533 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vcam1P29533 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.18■□□□□ 0.18
Vcam1P29533 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcam1P29533 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcam1P29533 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcam1P29533 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcam1P29533 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vcam1P29533 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcam1P29533 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcam1P29533 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vcam1P29533 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vcam1P29533 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Vcam1P29533 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcam1P29533 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcam1P29533 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Vcam1P29533 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcam1P29533 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcam1P29533 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcam1P29533 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vcam1P29533 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vcam1P29533 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vcam1P29533 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vcam1P29533 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.17■□□□□ 0.18
Vcam1P29533 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vcam1P29533 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vcam1P29533 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vcam1P29533 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.17■□□□□ 0.18
Vcam1P29533 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vcam1P29533 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vcam1P29533 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vcam1P29533 Gm12928-201ENSMUST00000117115 573 ntBASIC16.17■□□□□ 0.18
Vcam1P29533 Gm11425-201ENSMUST00000119608 498 ntBASIC16.17■□□□□ 0.18
Vcam1P29533 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vcam1P29533 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vcam1P29533 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vcam1P29533 Gm8584-201ENSMUST00000171982 758 ntBASIC16.17■□□□□ 0.18
Vcam1P29533 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vcam1P29533 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Vcam1P29533 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vcam1P29533 Gm7287-201ENSMUST00000205267 602 ntBASIC16.17■□□□□ 0.18
Vcam1P29533 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vcam1P29533 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vcam1P29533 Gm9396-201ENSMUST00000076703 567 ntBASIC16.17■□□□□ 0.18
Vcam1P29533 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.17■□□□□ 0.18
Vcam1P29533 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vcam1P29533 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.17■□□□□ 0.18
Vcam1P29533 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vcam1P29533 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vcam1P29533 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vcam1P29533 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vcam1P29533 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms