Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.42■□□□□ 0.22
Pde6aP27664 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6aP27664 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6aP27664 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.42■□□□□ 0.22
Pde6aP27664 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6aP27664 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6aP27664 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Pde6aP27664 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Pde6aP27664 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6aP27664 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6aP27664 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6aP27664 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6aP27664 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6aP27664 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Pde6aP27664 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6aP27664 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6aP27664 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6aP27664 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6aP27664 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6aP27664 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6aP27664 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6aP27664 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Pde6aP27664 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6aP27664 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6aP27664 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6aP27664 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6aP27664 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6aP27664 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6aP27664 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.41■□□□□ 0.22
Pde6aP27664 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6aP27664 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6aP27664 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6aP27664 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6aP27664 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.41■□□□□ 0.22
Pde6aP27664 Gm18027-201ENSMUST00000218947 619 ntBASIC16.41■□□□□ 0.22
Pde6aP27664 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6aP27664 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6aP27664 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6aP27664 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6aP27664 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6aP27664 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6aP27664 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.41■□□□□ 0.22
Pde6aP27664 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6aP27664 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6aP27664 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pde6aP27664 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6aP27664 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.41■□□□□ 0.22
Pde6aP27664 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6aP27664 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6aP27664 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6aP27664 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pde6aP27664 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6aP27664 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Pde6aP27664 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6aP27664 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pde6aP27664 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pde6aP27664 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pde6aP27664 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pde6aP27664 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pde6aP27664 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Pde6aP27664 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pde6aP27664 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pde6aP27664 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pde6aP27664 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.4■□□□□ 0.22
Pde6aP27664 Gm15487-201ENSMUST00000122373 465 ntBASIC16.4■□□□□ 0.22
Pde6aP27664 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.4■□□□□ 0.22
Pde6aP27664 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.4■□□□□ 0.22
Pde6aP27664 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pde6aP27664 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.4■□□□□ 0.22
Pde6aP27664 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pde6aP27664 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
Pde6aP27664 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pde6aP27664 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pde6aP27664 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.4■□□□□ 0.22
Pde6aP27664 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pde6aP27664 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pde6aP27664 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Pde6aP27664 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pde6aP27664 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Pde6aP27664 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pde6aP27664 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pde6aP27664 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pde6aP27664 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pde6aP27664 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pde6aP27664 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pde6aP27664 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pde6aP27664 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pde6aP27664 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pde6aP27664 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pde6aP27664 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.39■□□□□ 0.21
Pde6aP27664 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.39■□□□□ 0.21
Pde6aP27664 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pde6aP27664 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.39■□□□□ 0.21
Pde6aP27664 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.39■□□□□ 0.21
Pde6aP27664 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Pde6aP27664 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Pde6aP27664 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.39■□□□□ 0.21
Pde6aP27664 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pde6aP27664 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pde6aP27664 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms