Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Cntn1P12960 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cntn1P12960 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Cntn1P12960 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cntn1P12960 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cntn1P12960 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 Gm15321-201ENSMUST00000121290 288 ntBASIC13.59□□□□□ -0.23
Cntn1P12960 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.59□□□□□ -0.23
Cntn1P12960 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Cntn1P12960 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Cntn1P12960 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.59□□□□□ -0.23
Cntn1P12960 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.59□□□□□ -0.23
Cntn1P12960 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cntn1P12960 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cntn1P12960 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cntn1P12960 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cntn1P12960 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cntn1P12960 Syt7-205ENSMUST00000224135 1557 ntBASIC13.58□□□□□ -0.23
Cntn1P12960 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Cntn1P12960 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cntn1P12960 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cntn1P12960 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cntn1P12960 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.58□□□□□ -0.24
Cntn1P12960 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cntn1P12960 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cntn1P12960 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cntn1P12960 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cntn1P12960 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.58□□□□□ -0.24
Cntn1P12960 Gm33320-201ENSMUST00000192232 530 ntBASIC13.58□□□□□ -0.24
Cntn1P12960 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.58□□□□□ -0.24
Cntn1P12960 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cntn1P12960 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.58□□□□□ -0.24
Cntn1P12960 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cntn1P12960 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cntn1P12960 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cntn1P12960 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cntn1P12960 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cntn1P12960 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Cntn1P12960 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cntn1P12960 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cntn1P12960 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cntn1P12960 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cntn1P12960 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cntn1P12960 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cntn1P12960 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cntn1P12960 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cntn1P12960 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cntn1P12960 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cntn1P12960 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Cntn1P12960 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cntn1P12960 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.58□□□□□ -0.24
Cntn1P12960 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cntn1P12960 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cntn1P12960 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cntn1P12960 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cntn1P12960 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cntn1P12960 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cntn1P12960 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cntn1P12960 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cntn1P12960 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cntn1P12960 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.57□□□□□ -0.24
Cntn1P12960 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cntn1P12960 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cntn1P12960 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Cntn1P12960 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cntn1P12960 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cntn1P12960 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cntn1P12960 Gm15957-201ENSMUST00000118893 974 ntBASIC13.57□□□□□ -0.24
Cntn1P12960 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
Cntn1P12960 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.57□□□□□ -0.24
Cntn1P12960 Gm24694-201ENSMUST00000180054 110 ntBASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 193.6 ms