Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ly6c1P0CW02 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ly6c1P0CW02 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ly6c1P0CW02 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ly6c1P0CW02 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ly6c1P0CW02 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ly6c1P0CW02 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.87□□□□□ -0.51
Ly6c1P0CW02 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ly6c1P0CW02 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ly6c1P0CW02 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.87□□□□□ -0.51
Ly6c1P0CW02 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.87□□□□□ -0.51
Ly6c1P0CW02 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ly6c1P0CW02 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ly6c1P0CW02 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Ly6c1P0CW02 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ly6c1P0CW02 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ly6c1P0CW02 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.87□□□□□ -0.51
Ly6c1P0CW02 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ly6c1P0CW02 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ly6c1P0CW02 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ly6c1P0CW02 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ly6c1P0CW02 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ly6c1P0CW02 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Gm15487-201ENSMUST00000122373 465 ntBASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Gm43275-201ENSMUST00000202053 1020 ntBASIC11.86□□□□□ -0.51
Ly6c1P0CW02 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.86□□□□□ -0.51
Ly6c1P0CW02 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Ly6c1P0CW02 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ly6c1P0CW02 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ly6c1P0CW02 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ly6c1P0CW02 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ly6c1P0CW02 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ly6c1P0CW02 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ly6c1P0CW02 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ly6c1P0CW02 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ly6c1P0CW02 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Ly6c1P0CW02 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ly6c1P0CW02 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ly6c1P0CW02 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ly6c1P0CW02 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ly6c1P0CW02 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.85□□□□□ -0.51
Ly6c1P0CW02 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.85□□□□□ -0.51
Ly6c1P0CW02 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.85□□□□□ -0.51
Ly6c1P0CW02 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.85□□□□□ -0.51
Ly6c1P0CW02 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.85□□□□□ -0.51
Ly6c1P0CW02 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms