Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UbbP0CG49 Gm45747-201ENSMUST00000212203 999 ntBASIC12.34□□□□□ -0.43
UbbP0CG49 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.34□□□□□ -0.43
UbbP0CG49 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UbbP0CG49 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UbbP0CG49 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UbbP0CG49 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UbbP0CG49 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UbbP0CG49 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UbbP0CG49 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.34□□□□□ -0.43
UbbP0CG49 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.34□□□□□ -0.43
UbbP0CG49 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UbbP0CG49 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.34□□□□□ -0.43
UbbP0CG49 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UbbP0CG49 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
UbbP0CG49 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UbbP0CG49 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UbbP0CG49 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
UbbP0CG49 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.34□□□□□ -0.43
UbbP0CG49 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UbbP0CG49 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UbbP0CG49 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
UbbP0CG49 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
UbbP0CG49 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
UbbP0CG49 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
UbbP0CG49 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
UbbP0CG49 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
UbbP0CG49 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
UbbP0CG49 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
UbbP0CG49 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
UbbP0CG49 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
UbbP0CG49 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
UbbP0CG49 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.33□□□□□ -0.44
UbbP0CG49 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.33□□□□□ -0.44
UbbP0CG49 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.33□□□□□ -0.44
UbbP0CG49 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
UbbP0CG49 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
UbbP0CG49 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.33□□□□□ -0.44
UbbP0CG49 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.33□□□□□ -0.44
UbbP0CG49 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
UbbP0CG49 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.33□□□□□ -0.44
UbbP0CG49 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.33□□□□□ -0.44
UbbP0CG49 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
UbbP0CG49 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UbbP0CG49 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.32□□□□□ -0.44
UbbP0CG49 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.32□□□□□ -0.44
UbbP0CG49 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.32□□□□□ -0.44
UbbP0CG49 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.32□□□□□ -0.44
UbbP0CG49 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.32□□□□□ -0.44
UbbP0CG49 Gm9103-201ENSMUST00000119371 405 ntBASIC12.32□□□□□ -0.44
UbbP0CG49 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Gm27300-201ENSMUST00000184085 97 ntBASIC12.32□□□□□ -0.44
UbbP0CG49 Gm27335-201ENSMUST00000184758 97 ntBASIC12.32□□□□□ -0.44
UbbP0CG49 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.32□□□□□ -0.44
UbbP0CG49 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.32□□□□□ -0.44
UbbP0CG49 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms