Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smim1P0C8K7 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smim1P0C8K7 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smim1P0C8K7 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC9.73□□□□□ -0.85
Smim1P0C8K7 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smim1P0C8K7 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC9.72□□□□□ -0.85
Smim1P0C8K7 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC9.72□□□□□ -0.85
Smim1P0C8K7 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC9.72□□□□□ -0.85
Smim1P0C8K7 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC9.72□□□□□ -0.85
Smim1P0C8K7 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC9.72□□□□□ -0.85
Smim1P0C8K7 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Zfp125-201ENSMUST00000079237 2488 ntBASIC9.72□□□□□ -0.85
Smim1P0C8K7 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smim1P0C8K7 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smim1P0C8K7 Nudt18-202ENSMUST00000228554 3619 ntBASIC9.71□□□□□ -0.85
Smim1P0C8K7 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Smim1P0C8K7 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smim1P0C8K7 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smim1P0C8K7 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smim1P0C8K7 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.85
Smim1P0C8K7 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smim1P0C8K7 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smim1P0C8K7 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smim1P0C8K7 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Smim1P0C8K7 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smim1P0C8K7 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smim1P0C8K7 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smim1P0C8K7 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smim1P0C8K7 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Smim1P0C8K7 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Smim1P0C8K7 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smim1P0C8K7 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smim1P0C8K7 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smim1P0C8K7 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC9.71□□□□□ -0.85
Smim1P0C8K7 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smim1P0C8K7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
Smim1P0C8K7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smim1P0C8K7 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC9.71□□□□□ -0.86
Smim1P0C8K7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC9.71□□□□□ -0.86
Smim1P0C8K7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC9.71□□□□□ -0.86
Smim1P0C8K7 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Smim1P0C8K7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC9.71□□□□□ -0.86
Smim1P0C8K7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms