Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P06323 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P06323 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P06323 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P06323 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P06323 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P06323 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
P06323 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P06323 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P06323 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.48□□□□□ -0.57
P06323 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.48□□□□□ -0.57
P06323 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P06323 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.48□□□□□ -0.57
P06323 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P06323 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
P06323 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P06323 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P06323 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P06323 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P06323 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P06323 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P06323 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.48□□□□□ -0.57
P06323 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P06323 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
P06323 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P06323 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P06323 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P06323 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P06323 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P06323 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P06323 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
P06323 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P06323 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P06323 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
P06323 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P06323 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
P06323 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
P06323 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
P06323 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P06323 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
P06323 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
P06323 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P06323 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
P06323 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
P06323 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.47□□□□□ -0.57
P06323 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P06323 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P06323 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P06323 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P06323 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.47□□□□□ -0.57
P06323 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.47□□□□□ -0.57
P06323 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P06323 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.47□□□□□ -0.57
P06323 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC11.47□□□□□ -0.57
P06323 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P06323 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P06323 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
P06323 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P06323 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
P06323 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
P06323 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P06323 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
P06323 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P06323 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P06323 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P06323 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P06323 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.47□□□□□ -0.57
P06323 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P06323 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.47□□□□□ -0.57
P06323 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P06323 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
P06323 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
P06323 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
P06323 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
P06323 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.46□□□□□ -0.57
P06323 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.46□□□□□ -0.57
P06323 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.46□□□□□ -0.57
P06323 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P06323 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P06323 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
P06323 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
P06323 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P06323 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P06323 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P06323 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
P06323 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P06323 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.46□□□□□ -0.57
P06323 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
P06323 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.46□□□□□ -0.57
P06323 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
P06323 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P06323 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
P06323 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
P06323 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
P06323 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P06323 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P06323 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P06323 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.46□□□□□ -0.57
P06323 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P06323 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms