Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PrnpP04925 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PrnpP04925 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PrnpP04925 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PrnpP04925 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
PrnpP04925 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.61□□□□□ -0.07
PrnpP04925 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PrnpP04925 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PrnpP04925 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
PrnpP04925 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PrnpP04925 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PrnpP04925 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PrnpP04925 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PrnpP04925 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PrnpP04925 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PrnpP04925 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.6□□□□□ -0.07
PrnpP04925 Gm27847-201ENSMUST00000183711 107 ntBASIC14.6□□□□□ -0.07
PrnpP04925 Gm27375-201ENSMUST00000183799 107 ntBASIC14.6□□□□□ -0.07
PrnpP04925 Gm45784-201ENSMUST00000188360 142 ntBASIC14.6□□□□□ -0.07
PrnpP04925 Gm6983-201ENSMUST00000214912 628 ntBASIC14.6□□□□□ -0.07
PrnpP04925 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.6□□□□□ -0.07
PrnpP04925 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PrnpP04925 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PrnpP04925 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
PrnpP04925 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PrnpP04925 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PrnpP04925 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.6□□□□□ -0.07
PrnpP04925 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PrnpP04925 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.6□□□□□ -0.07
PrnpP04925 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PrnpP04925 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PrnpP04925 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.6□□□□□ -0.07
PrnpP04925 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.6□□□□□ -0.07
PrnpP04925 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PrnpP04925 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PrnpP04925 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PrnpP04925 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
PrnpP04925 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.59□□□□□ -0.07
PrnpP04925 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PrnpP04925 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.59□□□□□ -0.07
PrnpP04925 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.59□□□□□ -0.07
PrnpP04925 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PrnpP04925 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PrnpP04925 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PrnpP04925 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PrnpP04925 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PrnpP04925 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PrnpP04925 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PrnpP04925 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PrnpP04925 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PrnpP04925 Gm8652-201ENSMUST00000181363 964 ntBASIC14.59□□□□□ -0.07
PrnpP04925 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.59□□□□□ -0.07
PrnpP04925 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
PrnpP04925 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
PrnpP04925 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PrnpP04925 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PrnpP04925 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
PrnpP04925 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PrnpP04925 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PrnpP04925 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PrnpP04925 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PrnpP04925 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PrnpP04925 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PrnpP04925 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PrnpP04925 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.59□□□□□ -0.07
PrnpP04925 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PrnpP04925 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PrnpP04925 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PrnpP04925 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PrnpP04925 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PrnpP04925 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PrnpP04925 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PrnpP04925 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PrnpP04925 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PrnpP04925 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PrnpP04925 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
PrnpP04925 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
PrnpP04925 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
PrnpP04925 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PrnpP04925 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PrnpP04925 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
PrnpP04925 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.58□□□□□ -0.08
PrnpP04925 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PrnpP04925 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PrnpP04925 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PrnpP04925 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.58□□□□□ -0.08
PrnpP04925 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.58□□□□□ -0.08
PrnpP04925 Snora78-201ENSMUST00000158630 128 ntBASIC14.58□□□□□ -0.08
PrnpP04925 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.58□□□□□ -0.08
PrnpP04925 Gm7561-201ENSMUST00000211203 886 ntBASIC14.58□□□□□ -0.08
PrnpP04925 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.58□□□□□ -0.08
PrnpP04925 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PrnpP04925 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PrnpP04925 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PrnpP04925 Mir497b-201ENSMUST00000093601 125 ntBASIC14.58□□□□□ -0.08
PrnpP04925 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PrnpP04925 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
PrnpP04925 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PrnpP04925 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
PrnpP04925 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms